| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4004 |
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| Symbol | |
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| ID | 3969194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4453052 |
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| End bp | 4453561 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927108 |
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| Product | Allergen V5/Tpx-1 related |
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| Protein accession | YP_533849 |
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| Protein GI | 90425479 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.555051 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGGG TTGTTGTGGC CGGTCTCGGC CTGTTGCTGC TGGCCGGATG CGCCGGCGAG
GTGGCGCCGA GCGTCGAAGA GCCAGCGATG TATCTCAGCA TGGCCAATGG CGGCGCCAAG
CTCGATCCGC AGGCCGCGGC CTCGATGATC TCGCTGTACC GGCACAACAA CGGACTCGGC
CCGGTGGTGG TCGATCCGGC GCTGGTGGCG CTGGCGGAAG ACCAGTCGAT GACCATGGCC
AAGCGCAACA AGCTCGACCA CAATGTGAAA GCGCCGCTGC AGCAGCGGCT CAATGCCGGC
GGCTATCCGG CGACGCTTGC GGTGGAGAAC GTCTCCGCCG GATACCATAC GCTGGCCGAA
GCGTTCTCCG GCTGGCGGGA TTCGCCGCCG CACAAGGCCA ACATGCTGAA ATCCGGCGTC
ACAAAACTCG GCATCGCCGC GAGCTATGCG CCGAACACCA AATACAAGGT GTTCTGGACG
CTGATCCTGG CCTCGACGGA GGCGCGCTGA
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| Protein sequence | MLRVVVAGLG LLLLAGCAGE VAPSVEEPAM YLSMANGGAK LDPQAAASMI SLYRHNNGLG
PVVVDPALVA LAEDQSMTMA KRNKLDHNVK APLQQRLNAG GYPATLAVEN VSAGYHTLAE
AFSGWRDSPP HKANMLKSGV TKLGIAASYA PNTKYKVFWT LILASTEAR
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