Gene RPC_3993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3993 
Symbol 
ID3969339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4444597 
End bp4445565 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content65% 
IMG OID637927097 
Producthypothetical protein 
Protein accessionYP_533838 
Protein GI90425468 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.288603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGT TGGGGTGCCT GTTGGTGTTG CTGTCGTTCG CGGCGTTCGG CGGCGCGCCC 
GCCGTCGCGG AGCCGTTCCC GGTCAAATCG ATCAAGATCG TAGTGCCGTT TCCGGCCGGC
GGGACCACCG ACATCGTCGC CCGCTTCGTG GCGAAGTACC TCGGCGACGA ACTCGGCGTC
ACCACGGTGG TGGAGAATCG CGCCGGGGCG TCCGGCACCA TCGGCTCGGA GGCGGTGGCG
AAGTCGGATC CGGACGGCAG CGTGCTGCTG TTGACCGCGA CCCACCACGT CATCAATCCC
AGCCTGTACC GCAAGCTGCC CTACGACACC CAGAAGGATT TCTCGCCGAT CGCGATGGCC
GCTTCCGCCG CCAATGCGCT GATCGTCACC AAGGATTTCC CGGCGCAGAC GGTGCAGGAG
CTGATCGCGC TGGCGAAGAA AGATCCCGGT AAGTACTCGT TCGGATCGAC CGGGATCGGC
GGCGCCAACC ATCTCGCCGG CGAATTGTTC AAGCAGATGG CCGGGGTCGA TATCGTGCAT
ATCCCCTACA AGGGGGCGGC GCCGGCGATG AACGACCTGA TCGGCGGCCA TATCCCGATC
ATGTTCGATT CGCTGACCAC GGTGGTCCCG GCCGCCCAGG GCGGCGCGGT CCGGGTGCTG
GCGGTTACCA GCCTGCAGCG CGCGGCAGCC TTGCCCGACA TTCCGACGCT GAACGAATCC
GGGCTCAAGG GTTTTGAGGC CATCGGCTGG TTCGGGCTTT ATATGCCGCA GGCCCACGAC
AATCCGGCCT ATCAGAAACT GGTCGCCGCG ATGGCGAAGA TCCTGGCGGC GCCGGAGACC
AAACAGAAAT TCGCGGCGTT GTCGCTCGAA CCGGGGACGC TGACCGGCGC GGCATTCGGC
AAATTCGTCG ATAGCGAAAT CGTCAAATGG AACGGCATGG TCCGCGCCGC CAACGTGCCG
TTGGAGTGA
 
Protein sequence
MRKLGCLLVL LSFAAFGGAP AVAEPFPVKS IKIVVPFPAG GTTDIVARFV AKYLGDELGV 
TTVVENRAGA SGTIGSEAVA KSDPDGSVLL LTATHHVINP SLYRKLPYDT QKDFSPIAMA
ASAANALIVT KDFPAQTVQE LIALAKKDPG KYSFGSTGIG GANHLAGELF KQMAGVDIVH
IPYKGAAPAM NDLIGGHIPI MFDSLTTVVP AAQGGAVRVL AVTSLQRAAA LPDIPTLNES
GLKGFEAIGW FGLYMPQAHD NPAYQKLVAA MAKILAAPET KQKFAALSLE PGTLTGAAFG
KFVDSEIVKW NGMVRAANVP LE