| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3988 |
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| Symbol | |
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| ID | 3969334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4442157 |
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| End bp | 4442816 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637927092 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_533833 |
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| Protein GI | 90425463 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.374893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCATCGC TCCGTTCGGC CGCGCACCTG TTCCGCCCCG TCCTGCTGGT TGTCGCGACC
TTGCTCGCGG CGACGTTGGC GTTGCCGCAA GGCGCCAAGG CGCAGCGCCA CCCTTCGCCC
CCAGAGCTGA AGAAACTGCC CGAGCCCCCG GCCAAGCTGC CGAAGGTCGG CGCCGACCGC
ACCCGCGGAC TGGATTTCCT GTTCGGTGCG CTCAAAGCGG CGCCCGACGA GGCCAGCGCC
AAACATGTCG AAGCCCGGAT CTGGGCGCTG TGGGCGCAAA CCTCCAGCGA CACCACCGCG
CTGTTGATGT CGCGCTCGAA AGCAGCGCTC GACGCCGGCA AGACCGAGGT GGCGTTGAAG
CTGCTCGATT CGGTGGTCAA GCTGCGCCCC GACTATCTGG AAGGCTGGAA CAGGCGTGCC
ACGCTGTATT ACCTGCAGAA TGACTACACC CACTCGCTGC GGGACATCGA ACAGGTGCTG
GTGCGCGAGC CGCGGCATTT CGGAGCGCTG GCCGGGCTCG GCATGATCAT GCAGGATCTC
GGCGACGACA AGCGCGCGCT CGACGCCTTC CGTAAGGCGC TGGCGGTCAA TCCGCACCTC
GACAAGGTGC CGGAGCTGGT CAAGACCCTG ACCGAAAAGG TCGAGGGGCG GGACATCTAG
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| Protein sequence | MASLRSAAHL FRPVLLVVAT LLAATLALPQ GAKAQRHPSP PELKKLPEPP AKLPKVGADR
TRGLDFLFGA LKAAPDEASA KHVEARIWAL WAQTSSDTTA LLMSRSKAAL DAGKTEVALK
LLDSVVKLRP DYLEGWNRRA TLYYLQNDYT HSLRDIEQVL VREPRHFGAL AGLGMIMQDL
GDDKRALDAF RKALAVNPHL DKVPELVKTL TEKVEGRDI
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