Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3985 |
Symbol | |
ID | 3969331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4439307 |
End bp | 4440146 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637927089 |
Product | XRE family transcriptional regulator |
Protein accession | YP_533830 |
Protein GI | 90425460 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0640193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.244933 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAAG CAAACCCGCT CGGAACCTAT CTGAAGAACC GCCGCACCAA GCTCGATCCG GCGGCGCTGG GCTTCGCCGG CGGCCGGCGG CGCACCGCGG GCCTGCGCCG CGAGGAAGTG GCGCAGCGCG CCAATATCAG CGCCACCTGG TACACCTGGC TGGAGCAGGG CCGCGGCGGC AGCCCTTCGG CCGACGTGCT CGACCGCATC GCCCGCGCGC TGACGCTGAC CGCGGTGGAA CGCGAGCATC TGTTTCTGAT CGGCTTGGGC CGTCCGCCCG AGGTGCGCTA TCGCGGCAGC GACGCCATCA CGCCGCGGCT GCAGCGGCTG CTCGACACAT TGACGCTGAG CCCGGCGATC GTCAGGACGC CGACCTGGGA CGTCGTCGCC TGGAATCGCG CCGCCGTGGC GGTGCTGACC GACTACGGCG ATCTGCCGCC CGACCGGCGC AACATCTTGC GAATGATCTT TTGCGATCCC GACGTGCGCG AACGACAAGC CGACTGGAAT ACGGTGGCGC GCTTCGTGGT CGCCAGCTTC CGCATCGACG CGGCGCGCGC CGGCGCCGGC ACCGAGGTCG CCGCATTGGT CGAAGAGCTG AGCGTGGCGA GCCCGGAATT CGCGGCGATG TGGCGCGACA GCGATGTGCA AACCCAGGCC GGCGGCATGA AGCAATTGCT GCATCCGCAA GTCGGTCCGA TCACGTTGGA ATATTCGGCC TTCGCGGTCG ACGGCCGGCC CGACCTCAGC CTGATCGTCT ACAATCCGGC GACGCCGGCC GACCGCAAGC TGGTCGAGAC GCTGATCGAA CGACTGCCAG CCGAAACCAA GGCGGACTAA
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Protein sequence | MPEANPLGTY LKNRRTKLDP AALGFAGGRR RTAGLRREEV AQRANISATW YTWLEQGRGG SPSADVLDRI ARALTLTAVE REHLFLIGLG RPPEVRYRGS DAITPRLQRL LDTLTLSPAI VRTPTWDVVA WNRAAVAVLT DYGDLPPDRR NILRMIFCDP DVRERQADWN TVARFVVASF RIDAARAGAG TEVAALVEEL SVASPEFAAM WRDSDVQTQA GGMKQLLHPQ VGPITLEYSA FAVDGRPDLS LIVYNPATPA DRKLVETLIE RLPAETKAD
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