| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3978 |
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| Symbol | |
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| ID | 3969401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4432899 |
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| End bp | 4434524 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637927082 |
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| Product | hypothetical protein |
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| Protein accession | YP_533823 |
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| Protein GI | 90425453 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3108] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.346542 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGGCTG GATTCGCACG TCGTTTCTTG ACGCTGACAT CGACCCGCGC CGGGGTTCGG
GCCGGATTGG CGTCGTTGTT GCTGCTCGCA GGCGCAGGCT CCGTCCACGA CGCCACCGCG
CTAGGCGACA CCCGCACCCT CTCCTTCCAC CACACCCATT CCGACGAGAA CCTCACCGTC
ACCTTCAAGC GCAACGGCCG TTACGACGAA GCCGCGCTGC GAGAGATCAA CCACTTCCTC
CGCGACTGGC GCAGCCAGGA CCAGACCACG ATGGACCGTC GGCTGTTCGA CATCCTCTGG
GAAGTCTACC GCGACGTCGA CGCCAAGCAG CCGATCCAGA TCATCTCCGC CTATCGCTCC
CCCGCCACCA ACGCCATGCT GCGCCGCCGC TCGTCGGGCG TTGCCCGGGC CAGCCAGCAC
ATGCTCGGCC AGGCGATGGA TTTCTACATT CCCGGCGTGG CGCTGGAGCA GATCCGCTTC
GCCGGGCTGC GGCTGCAGCG CGGCGGCGTC GGCTTCTATC CGACCTCGGG TTCGCCGTTC
GTGCATCTCG ACACCGGCAA CATCCGACAC TGGCCGCGCA TGAGCCACGA CCAGCTGGCC
CGCGTATTCC CCAACGGCCG CACCGTGCAC GTGCCGTCCG ACGGCAATCC GCTTCCCGGC
TATCAGCTGG CGTTAGCCGA TATCGAGAAA CGCGGCGGCG CGTCGGATGC CACCGGCAGC
GGCCCGACCG GCTTCCTGGC CTCGCTGTTC GGCAAGAGCA AGTCCGGCAG CGACGAGGAT
GACGAGGGCG GTGCCGCCCC GGCCGTGGTC GCCAGCGCCG ACGCCGCCTC GCCGGCCGGC
CTGATGGCCG CAGCCCCCGG CAACATCAAG AACGCCCTGG TCAAGATCAT CGACAACGTG
CCGCTGCCGC GCGCCAAGCC GCCCGCAGTG GCCGCCTTCC AGGTGGCCTC GGCGGACGTC
CCGCCCGCTC CGATCGCGAA GCCGGTCGCC GAGAAGGCCG ACACCAAGCA AGACCCGAGC
AAGCCGCAAT CGCCCGCCGA CATCATCAAC GCCCGCGGCT TCTGGGACGA CATGCCGGCA
ACCAAGCAGG CGACGCCGGC GCAGGTCGCC GCGATCAGCG CCCGCCAGGC GCTCGCCGCC
GCCGACCCGC AATCCACCGC CACCATTTCC GAAAGCACGA TGCAGGCGAT GGCCTATGCG
CCGCCGCCGT CCGAGCGCGC CCAAGTTGTC GCCGCCAGCG CGCCGGTGCC GCGCAGCGTG
CGACCGGCGC AGCCGGCGCG CAATCAGATG GCGATCAACA ACGTCACCAC GGTGGTCGCC
AAGGGCCAGC GCGGCCACGG CGCGGTGGTC GCGACCTCGT CGCGGCTCGC CGCCGCGGCG
GTCAAGGACA ACGACGTCTG GATGCGCGCG ATGATCCTGG CGCCGAGCGC CTCGACCATG
ACCTCCACGG TGTTCGGCGA CACCGACCTC ACCATCCTGC GCGCGCATTT CAGCAAGCCG
CAGGCGGCCG TCGCCATGGC GTTCGCCGAC GATCCGCAGT CCGGCATGCA GTGCGAACAG
TTCACCGGCG CCGCCGTGGT GACGCTGTCG ACCACGCCGT TCACCCGCAC CGCGGCGCTG
CGCTGA
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| Protein sequence | MLAGFARRFL TLTSTRAGVR AGLASLLLLA GAGSVHDATA LGDTRTLSFH HTHSDENLTV
TFKRNGRYDE AALREINHFL RDWRSQDQTT MDRRLFDILW EVYRDVDAKQ PIQIISAYRS
PATNAMLRRR SSGVARASQH MLGQAMDFYI PGVALEQIRF AGLRLQRGGV GFYPTSGSPF
VHLDTGNIRH WPRMSHDQLA RVFPNGRTVH VPSDGNPLPG YQLALADIEK RGGASDATGS
GPTGFLASLF GKSKSGSDED DEGGAAPAVV ASADAASPAG LMAAAPGNIK NALVKIIDNV
PLPRAKPPAV AAFQVASADV PPAPIAKPVA EKADTKQDPS KPQSPADIIN ARGFWDDMPA
TKQATPAQVA AISARQALAA ADPQSTATIS ESTMQAMAYA PPPSERAQVV AASAPVPRSV
RPAQPARNQM AINNVTTVVA KGQRGHGAVV ATSSRLAAAA VKDNDVWMRA MILAPSASTM
TSTVFGDTDL TILRAHFSKP QAAVAMAFAD DPQSGMQCEQ FTGAAVVTLS TTPFTRTAAL
R
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