| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3977 |
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| Symbol | |
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| ID | 3969400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4430423 |
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| End bp | 4432615 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637927081 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_533822 |
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| Protein GI | 90425452 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.618754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGATG ATTCCAATGG CCGCCGCGGT TTCGACCGCG TTCTGATCGC TGTTGCGGCA
ACCTTCGTCA CGCTCTCCAG CGGAGCCGCC ATGGCGCAGT CCGGGCCGCA ACGCAGCCCT
GCCGATCTCG CCATCGACGC CGCCGTGCCG ATGCCTGAAC CCGCCAACCT GCCGCCGCCG
TCGATCGGCG ACTTCAAGCT CGACGCGGCC ACGACCAGCG CCACGACGTC CGACACCACC
GCTTCCGACA CCACCGCCCC CGACACCACC GCGTCGGTGC CACCCGCCGC CACCGTCGAA
GCGCCGAAGC AGGACGCCGC GGCGGCGCAG CCGACTGCGC CCGCTCCCGT CGCTGCCGTG
CCCGCGGTCG CGCCGGCCAA CGACATCGCG AAGGAAACCA GCGAGCCCGC CAAGTCGCAG
GCCTCGCAGC CCGCCGCCGA TACCAGCTCG AAGGATGCCG GCAAGACCGC CAGCGCCGTG
GCGCCGGCCG ATCTGCCGGT GGCCGAGAAG CTGCGCGAGA TGCTGGACGG CAAATCCACC
CGCTATTTCG ACCGCAAGGG CGAGCGCGCC GCTGTGGAGA AGTTCTACAC CGCGCGGGAT
TTCGCGCCGC TGTGGACGCA CGCCGGCGCC GTCACGCCGC TGGGCCACGG CGTGGTCGCG
CGGCTGAAGG ACGCCGCCGC CGACGGCCTC AACCCCGCCG ACTATCCGCT GCCGGATTTC
GCCGCCGCCG CCACGCCGGA GGCCTTGGCC GAGGCCGACC TGAAACTCAC CGCCAGCATG
TTGGACTACG CCCGGCAGGC GCAGAGCGGC CGGATGCATT GGTCGCAGGT CTCGGGCGAC
ATCCAGTATC CCGAACACCC GATCGACCCC GCCGAAGTGC TGGCCAATGT CACCGCCGCC
GCCGATCCGT CCGCGGCGCT GGCGAGCTAC AACCCGCCGC ACAAGATGTA TCGGCAATTG
AAGGCCAAGC TCGCCGAATT GCGCGGCCAG GGCGATGGCC CCGGCGCGAT CCAGATCGCC
GAGGGCCCGG CGCTGAAGTA CATTCCGGCG CGCAAGAAGC AGGCCGCCGT CGAGGTCGAC
GACCCGCGGG TGCCGCAGCT GCGCGCCAAG CTCGGCATCA GCGAGAATCC CGACAGCACC
CGCTACGACG CCAAAGTGGC CGCGGCGGTG CGCAAATTCC AGGACAGCGC CGACCTCAAG
GAAACCGGGG TTCTCGACGA GCGCACCGTG ACAGCGCTGA ACAGCCCGAA GAGCGACCGC
CAGATCGACA CCGTGATCGT CAACATGGAG CGCTGGCGCT GGCTGCCGCG CGTGCTCGGC
GCGCCGTCGC TCGGCGACGC CTACGTGATC CTCAACATCC CGGACTACAC CTTGAAGGTG
ATGCAGCACG GCGCCCCGGT CTGGACCACC CGCGTGGTGG TCGGCAAGCC CGGCAATCAC
GCCACGCCGC TTCTGACCGA GACGATGAAG TACATCACCG TCAACCCGAC CTGGAACGTG
CCGCCGTCGA TCATCTACAA CGAGTATCTG CCCGCTCTGC AGCAGGATCC GACCGTGCTG
GACCGCATGG GCCTGAAGCT CGAGCGCAAC CGCGACGGCT CGATCCACAT CTCGCAGCCG
CCCGGCGAAC GCAACGCGCT GGGCCGCATC CGCTTCAATT TCCCGAACAA ATTCCTGGTG
TATCAACACG ACACCCCGGA CAAGAATCTG TTCTCGCGCG ACGCCCGGGC GTTCAGCCAT
GGCTGTATGC GGGTGCAGAA CCCGGATCAA TACGCCGCCA CGCTGCTCAA CATCGCGATG
CCGAACGAGC GTTACACGCC GGAGAAGATC CGCGGCATGT ACGGCAAGAG CGAGATCGAC
CTGAAATTCG CCACCCCGAT CCCGGTCAAC CTCACCTATC AGACCGCCTT CGTCGACGAC
GCCGGCAAGC TGCAGACCCG CAAGGACGTC TATGGCCGCG ACGCGGCGAT GCTGGCGATC
TTGCGCAATC CCAAGGGCAA GGATCTGGAG AACGTGGTCG CCCACGCCCA GCCGAACTAC
GCGAGACCGC GCGCCGACAT TCCGCAGGGC GTGGCGTTCA ACGACGGCGC CGGCAACGCC
GAGCCGTCGT TCTTCGAACG GCTGTTCGGC GCCCCGAGCG CGCCGCCGGC GCAACAAAAT
CGGCGCCCGC AACGCAACGT GTTCGCCCGC TGA
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| Protein sequence | MRDDSNGRRG FDRVLIAVAA TFVTLSSGAA MAQSGPQRSP ADLAIDAAVP MPEPANLPPP
SIGDFKLDAA TTSATTSDTT ASDTTAPDTT ASVPPAATVE APKQDAAAAQ PTAPAPVAAV
PAVAPANDIA KETSEPAKSQ ASQPAADTSS KDAGKTASAV APADLPVAEK LREMLDGKST
RYFDRKGERA AVEKFYTARD FAPLWTHAGA VTPLGHGVVA RLKDAAADGL NPADYPLPDF
AAAATPEALA EADLKLTASM LDYARQAQSG RMHWSQVSGD IQYPEHPIDP AEVLANVTAA
ADPSAALASY NPPHKMYRQL KAKLAELRGQ GDGPGAIQIA EGPALKYIPA RKKQAAVEVD
DPRVPQLRAK LGISENPDST RYDAKVAAAV RKFQDSADLK ETGVLDERTV TALNSPKSDR
QIDTVIVNME RWRWLPRVLG APSLGDAYVI LNIPDYTLKV MQHGAPVWTT RVVVGKPGNH
ATPLLTETMK YITVNPTWNV PPSIIYNEYL PALQQDPTVL DRMGLKLERN RDGSIHISQP
PGERNALGRI RFNFPNKFLV YQHDTPDKNL FSRDARAFSH GCMRVQNPDQ YAATLLNIAM
PNERYTPEKI RGMYGKSEID LKFATPIPVN LTYQTAFVDD AGKLQTRKDV YGRDAAMLAI
LRNPKGKDLE NVVAHAQPNY ARPRADIPQG VAFNDGAGNA EPSFFERLFG APSAPPAQQN
RRPQRNVFAR
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