Gene RPC_3967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3967 
Symbol 
ID3969390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4420027 
End bp4420344 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content60% 
IMG OID637927071 
Productnicotinamide nucleotide transhydrogenase, subunit alpha2 
Protein accessionYP_533812 
Protein GI90425442 
COG category[C] Energy production and conversion 
COG ID[COG3288] NAD/NADP transhydrogenase alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.121873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.326432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACATA TTGTACAGGC CGTCGATCCG TTCGTGTTTC GGCTGTCGAT TTTCGTTCTC 
GCCGTGTTCG TCGGCTATTT CGTGGTGTGG TCGGTGACCC CCGCGCTGCA TACCCCGCTG
ATGAGCGTGA CCAACGCGAT CTCCTCGGTG ATCGTGGTCG GCGCCTTGCT GGCGGTCGGC
GTGGCGATGG TCGGCGAGGG CGGTGTGTGG GCGCGCGGCT TCGGCTTCGT CGCGCTGATC
TTTGCCTCGG TGAATATTTT CGGCGGCTTC CTTGTCACCC AGCGGATGCT GGCGATGTAC
AAGAAAAAGC AGAAGTGA
 
Protein sequence
MEHIVQAVDP FVFRLSIFVL AVFVGYFVVW SVTPALHTPL MSVTNAISSV IVVGALLAVG 
VAMVGEGGVW ARGFGFVALI FASVNIFGGF LVTQRMLAMY KKKQK