Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3966 |
Symbol | |
ID | 3969389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 4418613 |
End bp | 4420013 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637927070 |
Product | NAD(P) transhydrogenase, beta subunit |
Protein accession | YP_533811 |
Protein GI | 90425441 |
COG category | [C] Energy production and conversion |
COG ID | [COG1282] NAD/NADP transhydrogenase beta subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.155526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.614792 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCCA ATCTTTCCGC GCTTCTGTAT CTGATCGCTG GCGCGCTGTT CATTCTGTCG CTGCGCGGGC TGTCGTCGCC CGCCTCCAGC CGCCAGGGCA ACTTCCTCGG CATGACCGGC ATGGCGATCG CGGTCGCCAC CACGCTGGCC GGCCATCCTC CGGCCGACCT GCTCGGCTGG GGCCTCGTGA TCCTCGGCAT CGCCATCGGC GGCAGCATCG GCGCGGTGAT CGCCAAGAAG GTGCCGATGA CCTCGATGCC CGAACTGGTC GCCGCCTTCC ACTCGCTGGT CGGCATGGCC GCGGTGCTGG TCGCCGCCGG CGCGTTCTAC GCCCCCGAGG CGTTCGACAT CGGCGTCCCC GGCAACATTC ACGGCGCCAG CCTGATTGAA ATGTCGCTCG GCGTCGCGAT CGGCGCCCTG ACCTTCACCG GCTCGGTGAT CGCGTTCCTG AAATTGAGCG GCAAGATGAG CGGCGCGCCG ATCATTCTGC CCGCCCGTCA CGTCGTCAAC ATCGTGCTCG GCGTGGTGAT GCTGGCTGCG ATCGTCTATC TGGTGATCAC CGGCGACCAG GTCGCGTTCT GGGTCATCAC CGGCATCGCG CTGTTGCTCG GCGCCTTGCT GATCATCCCG ATCGGCGGCG CCGACATGCC GGTCGTGATC TCGATGCTCA ACTCCTATTC GGGTTGGGCC GCGGCCGGCA TCGGCTTCAC GCTGGGCAAT TCGGCGCTGA TCATCACCGG CGCGCTGGTC GGCTCGTCGG GTGCGATCCT GTCCTACATC ATGTGCCACG CGATGAACCG CTCCTTCATC TCGGTGATCC TCGGCGGCTT CGGCGGCGAG ACCGCCGCGG CCGGCGGCGG CGCCGGCGGC GAAGTGCGCC CGGTCAAGCT CGGCTCGGCC GACGACGCGG CCTTCATCAT GAAGAACGCC CAGAAGGTCA TCATCGTGCC GGGCTACGGC ATGGCGGTGG CGCAGGCCCA GCACGCGCTG CGCGAAATGG CCGACACGCT GAAGAAGGAA GGCGTCGAGG TGAAGTACGC GATTCATCCG GTCGCCGGCC GTATGCCGGG CCACATGAAC GTGCTGCTCG CCGAAGCCAA CGTGCCCTAC GACGAGGTGT TCGAACTCGA GGACATCAAC TCGGAATTCG CGCAGGCCGA CGTGGCCTTC GTGATCGGCG CCAACGACGT CACCAACCCG GCGGCCGAGG ACGACAAGAC CTCGCCGATC TACGGCATGC CGGTGTTGCA GGTCTGGAAG GCCGGCACCG TGATGTTCAT CAAGCGGTCG TTGGCGTCGG GTTATGCCGG CATCGACAAC CCGCTGTTCT ATCGCGACAA CACGATGATG CTGCTCGGCG ACGCCAAGAA GATGACCGAG AACATCGTCA AGGGCATGTA A
|
Protein sequence | MNANLSALLY LIAGALFILS LRGLSSPASS RQGNFLGMTG MAIAVATTLA GHPPADLLGW GLVILGIAIG GSIGAVIAKK VPMTSMPELV AAFHSLVGMA AVLVAAGAFY APEAFDIGVP GNIHGASLIE MSLGVAIGAL TFTGSVIAFL KLSGKMSGAP IILPARHVVN IVLGVVMLAA IVYLVITGDQ VAFWVITGIA LLLGALLIIP IGGADMPVVI SMLNSYSGWA AAGIGFTLGN SALIITGALV GSSGAILSYI MCHAMNRSFI SVILGGFGGE TAAAGGGAGG EVRPVKLGSA DDAAFIMKNA QKVIIVPGYG MAVAQAQHAL REMADTLKKE GVEVKYAIHP VAGRMPGHMN VLLAEANVPY DEVFELEDIN SEFAQADVAF VIGANDVTNP AAEDDKTSPI YGMPVLQVWK AGTVMFIKRS LASGYAGIDN PLFYRDNTMM LLGDAKKMTE NIVKGM
|
| |