| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3965 |
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| Symbol | |
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| ID | 3969388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4417271 |
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| End bp | 4418353 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637927069 |
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| Product | sodium/calcium exchanger membrane region |
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| Protein accession | YP_533810 |
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| Protein GI | 90425440 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0387] Ca2+/H+ antiporter |
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| TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.116135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.85718 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGACGT CGGCCTGGGC GTTCCCCGCG GCGGCGGCGC TGCTGTTCGC CGCGAGCTCG
ATCTTGCACC TGGATTTCGC CCCGACGGTG TTCGGCTTCG GCTTCGCCGC GGTGCTGCTG
GTGGTGCTGT TCGGCACCGT GTTCGCCGCG GTGCATCACG CCGAGGCGGT GGCGCACCGC
ATCGGCGAGC CCTACGGCAC GCTGCTGCTG ACGATGGCGG TGACGCTGAT CGAAGTGTCG
CTGATCACCA CCATGATGCT CGGCGACAAG GTGGTGCCGA CGCTGGCGCG CGACACCGTG
TTCGCGGTGG TGATGATCGT CTGCAACGGC TTGGTCGGGC TGTGCATCCT GATCGGCGGG
CTGCGTTTCA GGGAGCAGGA ATTCCACATC TCCGGCGCCA GCCTCTACCT CAGCGTGCTG
ATCGTGCTGT CGACCATCAT CCTGATCCTG CCGAATTACA CCTTCGCCGA TCCAGGCCCG
TTCTATTCCG CCGCGCAACT GGCCTTCGTC AGCCTCACCA CCGTGGTGCT GTACGTGCTG
TTTCTCTACA CCCAGACCTT CCGGCATCGC GATTATTTCG TCGGCAGGCA TTCCGGAGCC
GAGCCGGCGC AGGCGAGCCA CGCGGCCGGC GGCAGCCTGG CGCTCAGCGT CGGGCTGTTG
GCGATCGCCT TGCTCGGCGT GGTGCTGCTG GCGGAGAAGT TCTCGCATGT GGTCGAGACC
GCGACCGAAT GGCTGGGGGC GCCGGTCGCC TTCGCCGGCC TGGTGGTGGC CGGGCTGATC
CTGCTGCCCG AGAGTCTGGC GGCGATCGGG GCGACCCGCC GCAACGACCT GCAGAAGGGC
ATCAACCTGT CGCTGGGCTC GTCGCTGGCC ACCATCGGCC TGACCATCCC GGCGGTCTCC
ACGGTGGCGC TGTTGCTCGA CAAGCGCCTG GTGCTCGGGT TGGAATCCCA GGAGGCCGTG
CTGCTGGTGC TGACCTTCTT CGTCAGCATG CTCACCTTCG GCACCGGCCG CACCAACATC
CTGTTCGGGC TGGTCCATCT GGTGGTGTTC GCGGTGTTCG TCTTCCTGGT GTTCATTCCC
TAG
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| Protein sequence | MPTSAWAFPA AAALLFAASS ILHLDFAPTV FGFGFAAVLL VVLFGTVFAA VHHAEAVAHR
IGEPYGTLLL TMAVTLIEVS LITTMMLGDK VVPTLARDTV FAVVMIVCNG LVGLCILIGG
LRFREQEFHI SGASLYLSVL IVLSTIILIL PNYTFADPGP FYSAAQLAFV SLTTVVLYVL
FLYTQTFRHR DYFVGRHSGA EPAQASHAAG GSLALSVGLL AIALLGVVLL AEKFSHVVET
ATEWLGAPVA FAGLVVAGLI LLPESLAAIG ATRRNDLQKG INLSLGSSLA TIGLTIPAVS
TVALLLDKRL VLGLESQEAV LLVLTFFVSM LTFGTGRTNI LFGLVHLVVF AVFVFLVFIP
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