| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3959 |
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| Symbol | |
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| ID | 3969246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4412608 |
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| End bp | 4413291 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637927063 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_533804 |
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| Protein GI | 90425434 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.269646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA AATCCAGCGC CCCTGCTGCC GCAAAAGCCG GCAGTCGCCG CCAGCCCACA
AAAACGGCAA AGCTCGCCGC CGACCCGTTG GCGGCGCGGC TGAAGGCTGC CAATCTGGAA
AATCGGCGGC TCAAGGCGCA GCTCGCCGCC GCGCGTGCCA AGCTCGACGA GATGCGGGCC
TCGGCCGATA CCGACTTCCT GCTCGACATT CTCAACCGCC GCGGCTTCGA ACGGGAGCTC
AATCGGGCGA TCGCCTACAT CCAGCGCTAT CACGCCAGCG GCGCGCTGAT CATGCTGGAT
GTCGATCACC TGAAGCCGAT CAACGATCGG TTCGGCCATG CCGCAGGCGA CGAGGTGCTC
AGGTCGGTGG TCGACGTGCT GCAGCATCAC GTCCGGGCGT CCGACATCGT CGCCCGGCTC
GGCGGCGACG AATTCGTGCT GCTGCTGTGG AATTTGACCG AGGCGGACGC CCAGGCCAAG
GCGGAGGCGC TGGAAGCCGC CGTCGACGCC TTGCAATTCG GGTTTGCCGG ACGGACCGCG
TCGGCCGGGA TTTCCGCCGG CATCGCGACG CTGGGACCGG GCACCGACGC GCGCGCCGCG
CTGGCGCAGG CCGATCGCGC GATGTATGCG CGCAAGGCGA TCCGGCATCA GCAGCGCGCC
GCGGCGGCCG CGATCACGCG ATGA
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| Protein sequence | MSKKSSAPAA AKAGSRRQPT KTAKLAADPL AARLKAANLE NRRLKAQLAA ARAKLDEMRA
SADTDFLLDI LNRRGFEREL NRAIAYIQRY HASGALIMLD VDHLKPINDR FGHAAGDEVL
RSVVDVLQHH VRASDIVARL GGDEFVLLLW NLTEADAQAK AEALEAAVDA LQFGFAGRTA
SAGISAGIAT LGPGTDARAA LAQADRAMYA RKAIRHQQRA AAAAITR
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