Gene RPC_3958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3958 
Symbol 
ID3969245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4412412 
End bp4412618 
Gene Length207 bp 
Protein Length68 aa 
Translation table11 
GC content61% 
IMG OID637927062 
Producthypothetical protein 
Protein accessionYP_533803 
Protein GI90425433 
COG category[S] Function unknown 
COG ID[COG5481] Uncharacterized conserved small protein containing a coiled-coil domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.276587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG AAGATGAGCG CGAACTCGGC GCCGAACTCG CAAAGCTGCA GCAGGAACAC 
CGCGATCTCG ACGCGGCGAT CGACGCGTTG CATCATTCGC CGGCGCCGGA TCTGTTGCGG
CTGCAACGGC TGAAGAAACG CAAGCTCAGC CTGCGCGACC GCATCGCCTT CATCGAAGAT
CAGATTACCC CCGACATCAT CGCGTGA
 
Protein sequence
MTDEDERELG AELAKLQQEH RDLDAAIDAL HHSPAPDLLR LQRLKKRKLS LRDRIAFIED 
QITPDIIA