Gene RPC_3957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3957 
Symbol 
ID3969244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4411867 
End bp4412049 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content50% 
IMG OID637927061 
Producthypothetical protein 
Protein accessionYP_533802 
Protein GI90425432 
COG category[S] Function unknown 
COG ID[COG5570] Uncharacterized small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.275498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTTC AAGCGCATCT CGTTGAATTG GAACGTAAAC ATCAGATTTT GGAGACCGAA 
CTGCACGAAG CTCTTGTTCA TCTTTCCACC GACGACCTGC GAATTGTTGA ATTGAAGCGC
CGTAAACTGA TGGTCAGAGA CCAGATCGCC CGCCTGCGGC AAAATGTCGA CACGCTGCAC
TAG
 
Protein sequence
MALQAHLVEL ERKHQILETE LHEALVHLST DDLRIVELKR RKLMVRDQIA RLRQNVDTLH