| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3953 |
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| Symbol | |
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| ID | 3969240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4405293 |
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| End bp | 4406207 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637927057 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_533798 |
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| Protein GI | 90425428 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.258723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGCGC GGCAGATCTT CACCCGCCCG GCGCGGCTGG CGGCGATCGC GCCGTTCGTC
TGGATGCTGC TGCTGTTCCT GGTGCCGTTC GGTTTCGTGG TGAAGATCAG CCTGTCGCAA
GCGGTGATCG CGCAGCCGCC TTACGTCCCG CAGTTCGACC TCAGCGCCGG TTGGGCGTCG
CTGCAAGCGG CGTTCGCTAC GCTGTCGCTC GACAATTTCA AGCTGCTCGC CGCCGATCAG
CTCTATTGGC GGTCCTACCT GCGCAGCCTC GCGGTGGCGG CGAGCGCGAC CGCTGTGCTG
ATACTGATCG GCTATCCGAT CGCCTACGCG ATGGCGCGGT TGCCGCGGCG CTGGCAGGCG
GTGGCGATGA TGCTGGTGAT CGTGCCGTTC TGGACCTCGT TCTTGATCCG GATCTACGCC
TGGATCAACA TCCTGCAACA TGACGGGTTG CTGAACCAGA TCCTGCTGGC GCTGCATCTG
GTGTCGGCGC CGGTGGTGTG GCTGTCGACC GACTGGGCGA TGATGCTCGG CCTGGTGTAT
TCCTATCTGC CGTTCATGAT CCTGCCGCTC TATGCGACGC TTGCGAAGAT TCCGGCTTCG
CTGCTGGAGG CCGCCCAAGA CCTCGGCGCC TCGCCGCGCC GCGCGTTCTG GCTGGTGACC
TTTCCGCTGT CGCTGCCCGG CGTCGGCGCC GGGGTGCTGT TGTGCTTCAT CCCGATCGTC
GGCGAATTCG TCATCCCGGA TCTGCTCGCC GGTTCCGGTT CGATGATGAT CGGGCAGACG
CTGTGGCTGG AGTTCTTCAC CAACAAGGAC TGGCCGGTGG CCTCGGCGCT GGCGGTGCTG
CTGTTGGCGC TGCTGCTCGT GCCGCTGTTG GTCTACGAGC GGCTGCAGCG CCGGCAATTG
GAGGGGCGGC GGTGA
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| Protein sequence | MSARQIFTRP ARLAAIAPFV WMLLLFLVPF GFVVKISLSQ AVIAQPPYVP QFDLSAGWAS
LQAAFATLSL DNFKLLAADQ LYWRSYLRSL AVAASATAVL ILIGYPIAYA MARLPRRWQA
VAMMLVIVPF WTSFLIRIYA WINILQHDGL LNQILLALHL VSAPVVWLST DWAMMLGLVY
SYLPFMILPL YATLAKIPAS LLEAAQDLGA SPRRAFWLVT FPLSLPGVGA GVLLCFIPIV
GEFVIPDLLA GSGSMMIGQT LWLEFFTNKD WPVASALAVL LLALLLVPLL VYERLQRRQL
EGRR
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