| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3952 |
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| Symbol | |
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| ID | 3969239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4404092 |
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| End bp | 4404892 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637927056 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_533797 |
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| Protein GI | 90425427 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.108007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCTGT CGCGGTTCAA CATCGCCGCG CTGGCATTCG GATTGGCGTT TCTCTATCTG
CCGATCGTGA TCCTGGTGAT CTACTCGTTC AACGCCTCGC GTCTGGTGAC GGTGTGGGGT
GGCTGGTCGA CCCGCTGGTA CGCCGAGTTC TTCAACGACC AGGCGATGCT GGCGGCCGCC
TGGATGAGTT TTCGCGTGGC GCTGGCCTCG GCGAGCGCAG CGACGCTGAT CGGCACGCTG
GCCGCGGTGG CGCTGTCGCG CGGCGGGCAT TTCCGCGGCC GCACGCTGTT CTCCGGGATG
CTGTATGCGC CCTTGGTGAT GCCGGAAGTG ATCACCGGGC TGTCGCTATT GTTGTTGTTC
GTCGCGCTCG ACGCCGGGCG CGGATTTTGG ACCGTGACCC TCGCCCATAC CACGCTGACG
ATGTGCTTCG TCGCGGTGGT GGTGCAGTCG CGGCTGGGCG CACTCGACCG CAGCCTGGAG
GAAGCCGCGA TGGATCTCGG CTGTCCGCCG CTGCGGGCGT TTGTCGCCGT GACGCTGCCG
CTGATCACGC CTGCGATCGC GGCCGGCTGG ATGCTGGCGT TCACGCTGTC GCTGGACGAT
CTGGTGATCG CTAGCTTCAC CACCGGCCCG GGCTCGGCGA CGCTGCCGAT CCGGATCTAT
TCGGAAGTGC GGCTCGGGGT GAAGCCGGAG ATCAACGCGA TCTGCACGCT GATCATCGCG
GCGGTGACGC TGCTGATCAT CGCCGCCTCG CTGGCGTCGA AGCTGTCGAG CGCCCGCGCC
GACAGCGCCG CGCCGATGTG A
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| Protein sequence | MRLSRFNIAA LAFGLAFLYL PIVILVIYSF NASRLVTVWG GWSTRWYAEF FNDQAMLAAA
WMSFRVALAS ASAATLIGTL AAVALSRGGH FRGRTLFSGM LYAPLVMPEV ITGLSLLLLF
VALDAGRGFW TVTLAHTTLT MCFVAVVVQS RLGALDRSLE EAAMDLGCPP LRAFVAVTLP
LITPAIAAGW MLAFTLSLDD LVIASFTTGP GSATLPIRIY SEVRLGVKPE INAICTLIIA
AVTLLIIAAS LASKLSSARA DSAAPM
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