| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3920 |
|---|
| Symbol | |
|---|
| ID | 3969186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 4351761 |
|---|
| End bp | 4353872 |
|---|
| Gene Length | 2112 bp |
|---|
| Protein Length | 703 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637927023 |
|---|
| Product | ParB-like nuclease |
|---|
| Protein accession | YP_533765 |
|---|
| Protein GI | 90425395 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCAG TTCATAAGAT CAAGCTCAGC CCATCCCGCG ACATTCCCTT CAACAAGCTG
GTCCTGAGCC AGTCCAACGT CCGCCTGATC AAGGCCGGCG TCTCGATCGA GCAGTTGGCG
GAGAGCATTG CGCTGCGCAC CCTGCTGCAA AGTCTGAGCG TCCGCGCGGT AATCGACGCC
GACGGGCAGG AGACCGGGAT GTTCGAGGTG CCGGCCGGCG GGCGGCGCTA CCGCGCCCTC
GAACTCCTGG TGAAGCAGAA GCGGATGGCG AAGACGCAAC CCGTGCCATG CGTGGTTCGG
GATGACGGCA TCGCCGAGGA CGACTCGCTT GCCGAGAATG ACGAGCGGGT CGGGTTGCAT
CCGCTCGACC AGTTCCGCGC GTTCAAGACC CTGCACGAAG GCGGCATGAG CGAGGAGGAC
ATCGCCGCCC GGCACTTTGT GTCGCCCGCG ATCGTCAAAC AGCGCCTGCG TCTTGCGTCG
GTGTCGCCGA AGTTGCACGA GGTCTATGCC GATGACGGCA TGACGCTGGA GCAGTTGATG
GCGTTCTCCG TCACCGCCGA CCAGGCCCGC CAGGAGCAGG TCTGGGACAA TGTCAGCCGC
TCCCAGCTCG ATCAGCCTTA TCAAATTCGC CGGATGCTGA CCGAGAACAG CGTCCGCGCC
TCCGATCGAC GCGCCCAGTT CATCGGTCTG GATGCCTATC AGCAATCCGG CGGAACAGTC
CTGCGCGACC TTTTCGAACA TGACGATGGC GGCTGGCTGC AGGATGTGGC GCTGCTGGAT
CGCCTCGTCA CCGAGAAGCT AAAGGTGGAG GCCGAGACCA TCGCGGCGGA AGGTTGGAGG
TGGATTTCGG TGGCGGTCGA TTTCCCGTAT GGCCACACCA ACAATCTGCG CGAACTGGAC
GGGGTGACGA CCGAGTTGAG CGAGGACGAG CAGACAGCGA TCGGCGCGTT GAACGCCGAA
CAGGCCAAGC TGGAGGCGGA CTGTGCCGAA GCCGACGAAC TGCCTGACGA AGTCGACCAA
CGGCTTGGTG AGATCGAGAT GGCGCTGTCG GCCTTCGAGA CGCGCCCGGT AATCTACGAT
CCGGCCGACA TCGCACGTGC CGGGGTTTTC ATCAGCATCG ATGGCGAAGG CGCATTGTCG
GTCGATCGCG GCTATGTGCG GCCGGAAGAC GAAGCGCCTG TGAATGTTGA CCCGGAGGTG
GAATCCGCTG CTCACGGCGG AACCCTTGAT GGCGAGCAGA ATCAACCTGT GGTCCAGCGC
GCCGTCATCA CCGTCGGCGG TGGTCCCGCG GAGTCAGACG ATGACGAGGA CGACGTCATC
AAGCCGTTGC CGGATCGGCT GATCACCGAA CTGACCGCGC ATCGGACGCT GGCGCTGCGC
AACGCACTGG CGAATGATCC GGCCATCGCC TTCTCTGCAG TATTGCACAA CTTCGTGCTG
GCGACATTCT ATCGCTTCGC GTCATCGAGC AGTTGTCTGG AAATCGCGGT TCGCACACCG
ACTCTGCCGG TGCAGGCCCC GGGTCTCAAC GACAGCGTGT CGGCCAAGGC GATCGAGGCG
CGCCATGATG GATGGAAGGC TCGTTTGCCG CGAGACGAGG GCGACCTCTG GAATATGCTG
ACCGCGCTGG ACACGGCCGA GCAGTCATCG CTGTTTGCGC ATTGCGCCTC GTTCGGGGTG
AACGCGCTCT ACGAGCCGGC CAATCGCTTC AATGACGGCC GCGTCTCCGC GCACGGCGTT
CGTCGCAGAC TCGATCATGC CGATGTGCTG GCACGTACCG TCGGCCTCGA CATGGTGGCG
GCGGGCTGGA CCACGGGCGT CGATAACTAT CTCGGTCGGG TCACCAAGCC CAGGATTCTC
GAAGCGGTGC GCGAGGCCAA GGGTGAATCA TCGGCGCAAC TGATCGACCA CCTCAAGAAG
GGCGACATGG CCCGCGAGGC CGAGCGGCTG TTGGAGGGAT CGGCCTGGCT GCCCGAACCG
CTTCGGCTGC CCGACGCCGA AGCTGCTGCC GTGACCGGCG AAGCCGAGGC CTTGCCTGAC
TTCCTCGCCG ATGACGACGA GGAACAGGCC GAGGCCGATG AAGATCAGCC TCGCGTGATC
GCGGCGGAAT GA
|
|---|
| Protein sequence | MASVHKIKLS PSRDIPFNKL VLSQSNVRLI KAGVSIEQLA ESIALRTLLQ SLSVRAVIDA
DGQETGMFEV PAGGRRYRAL ELLVKQKRMA KTQPVPCVVR DDGIAEDDSL AENDERVGLH
PLDQFRAFKT LHEGGMSEED IAARHFVSPA IVKQRLRLAS VSPKLHEVYA DDGMTLEQLM
AFSVTADQAR QEQVWDNVSR SQLDQPYQIR RMLTENSVRA SDRRAQFIGL DAYQQSGGTV
LRDLFEHDDG GWLQDVALLD RLVTEKLKVE AETIAAEGWR WISVAVDFPY GHTNNLRELD
GVTTELSEDE QTAIGALNAE QAKLEADCAE ADELPDEVDQ RLGEIEMALS AFETRPVIYD
PADIARAGVF ISIDGEGALS VDRGYVRPED EAPVNVDPEV ESAAHGGTLD GEQNQPVVQR
AVITVGGGPA ESDDDEDDVI KPLPDRLITE LTAHRTLALR NALANDPAIA FSAVLHNFVL
ATFYRFASSS SCLEIAVRTP TLPVQAPGLN DSVSAKAIEA RHDGWKARLP RDEGDLWNML
TALDTAEQSS LFAHCASFGV NALYEPANRF NDGRVSAHGV RRRLDHADVL ARTVGLDMVA
AGWTTGVDNY LGRVTKPRIL EAVREAKGES SAQLIDHLKK GDMAREAERL LEGSAWLPEP
LRLPDAEAAA VTGEAEALPD FLADDDEEQA EADEDQPRVI AAE
|
|---|
| |