Gene RPC_3918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3918 
Symbol 
ID3969184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4346189 
End bp4347220 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content65% 
IMG OID637927021 
Producthypothetical protein 
Protein accessionYP_533763 
Protein GI90425393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.939983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTCAA GTGCTGCGGA TCTGGCGCAT CGTCTCGCGC GTGAGGCCGA GGCGGTGTGC 
CGCCTCTATC TCTCCAACGG ACGCCGGGTC GGCAATTATT GGCAGGTCGG GGACGTCAGG
AACACCGCCG GCCGCTCGAT GTTCGTGCGC CTGAAGGGCA GGGACCGCGG GCGCCCCGCG
GGCAAATGGA CCGACGCCGC CACCAGCGAG CATGGTGATC TGCTCGACGT GATCCGGGAA
AGTTGCGGCC TGGCCGATTT CCGCGATGTC GCCGATGAGG CACGGCGCTT CCTGAGCCAG
CCACGATCCG ATCCAGAGCG GGACCACTGG CACGGACCAT CCCAGGCTCC AACCGGCTCG
CCGGAATCGG CACGGCGGCT GTTCGCGATG ACGAGGCCGA TTGTTGGGAC GCTCGTCGAA
ACCTACCTGC GTCATCGCGG CATCACCAAC CTGAACGATA TCGCCAGCCT GCGCTTTCAT
CCCCGCTGCT ACTATCGCCC GGATAGGGAT GAGCCAACCC AGACCTGGCC TGCGATGATC
GCAGCCGTCA CCGATCTTGA AGGGCATATC ACCGGGGCTC ATCGCACCTG GCTCGATCCG
TCCGGCATCG ACAAGGCGCC GATCGATACA CCGCGACGCG CGATGGGCGA TCTTCTTGGC
AACGCCGTCC GCTTCGGTGT GGCCGCGGAT GTGATGGCGG CGGGCGAAGG CATCGAAACC
ATGCTGTCAC TGCGCGAGGT CATGCCGAAC ATGCCGATGG CCGCTGCATT ATCGGCGGCA
CATCTCGGGG CCATCCTGTT TCCGGCAACG CTGCGCCGTC TCTATATCGT CCGCGACAGC
GATCGGGCCG GCGATAGCGC GCTGGAATGG TTGCTTGGCC GAACGCAGGC AGCGGGAATC
GAGCCGATTG CACTGTCGCC ACGCGGCGGC GACTTCAACG AGGATCTTCG GGAGCTTGGC
ATCGACGCGC TTCGGGCTTT GGTGCGGAGG CAGATTAGCC CGGACGACGT CTTACGTTTC
ATGCAGTGCT GA
 
Protein sequence
MTSSAADLAH RLAREAEAVC RLYLSNGRRV GNYWQVGDVR NTAGRSMFVR LKGRDRGRPA 
GKWTDAATSE HGDLLDVIRE SCGLADFRDV ADEARRFLSQ PRSDPERDHW HGPSQAPTGS
PESARRLFAM TRPIVGTLVE TYLRHRGITN LNDIASLRFH PRCYYRPDRD EPTQTWPAMI
AAVTDLEGHI TGAHRTWLDP SGIDKAPIDT PRRAMGDLLG NAVRFGVAAD VMAAGEGIET
MLSLREVMPN MPMAAALSAA HLGAILFPAT LRRLYIVRDS DRAGDSALEW LLGRTQAAGI
EPIALSPRGG DFNEDLRELG IDALRALVRR QISPDDVLRF MQC