Gene RPC_3917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3917 
Symbol 
ID3969183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4344912 
End bp4345895 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content64% 
IMG OID637927020 
Producthypothetical protein 
Protein accessionYP_533762 
Protein GI90425392 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCCG CGATGGGCGC GGTCGATCCG CCAGAGGCGA GTATCATGAC CATCGATCAC 
GACGACATCG GCTTCGAGCC GCAGCAAAGC GCATCGCCAA CCGACCACAT CCTGACCGAG
CTGCAGCTCC ACGGCTATCG TCCGTTCCAG GACGAGCCAG ATCCGAGACC TTTGCCCGAA
GCGCGAATGA TCGCGGGCGC CATCGCCGAC ATCTTCGATG CCCTTGTCGC CACGCTGAGC
GAAACCCGTC TCGAGCCCGA TCTTCAGGAT CTGCTGTGGT CGACCGTCAA TCTCTTCCAC
CGCGCCAACG AACGCATCGA GCGTGAACTC GATGACAACG AACAGGCGCA GAAGCGCAGC
CAGCGCGACC AGGATGGCTC CGAAATCCGC TCGGTGGAAC TGGAGCGCCT CACCGCCGAA
GGCATGACCC TGATCGAGCG CCGCAACACC ATAGAATTCT TCCGCGACCA GGCCGCCGAA
CACTTCGTTC GCCACACCGG ATCGCACTGG CATCCGCGCA GCGGCTCGAT GGTGAACCAC
CGCGCTCTGA CTTCGGCGGT GATCGACAGC CGCGACTTTA TCGCCGCCAG ACGCCGCGCC
GAGACCGAGG TGCTCCTGCC CGCAGGACCG AAGATTGCCG TCACCGGCGG GCTTAACTTC
AACGATCACC GGCTGATCTG GGACAAACTC GATCAGGTCC ACGCCAAGCA CCCCGACATG
GTGCTGCTGC ACGGCGGTTC GCCGAAGGGT GCAGAACGCA TCGCTGCCCG ATGGGCCGAC
CACCGCAAGG TACCGCAGAT CGCCTTCAAG CCGGACTGGA CCAAACACGC CAAGGCCGCG
CCGTTCAAGC GCAACGACCA GATGCTCGAT GTGCTGCCGA TCGGCGTGAT GGTATTCCCC
GGCACCGGCA TTCAGGAGAA CATGGCCGAC AAGGCACGCA AGCTCGGCAT CCCGGTCTGG
AAATTCGGAG AGCGCGGCGC GTAA
 
Protein sequence
MKAAMGAVDP PEASIMTIDH DDIGFEPQQS ASPTDHILTE LQLHGYRPFQ DEPDPRPLPE 
ARMIAGAIAD IFDALVATLS ETRLEPDLQD LLWSTVNLFH RANERIEREL DDNEQAQKRS
QRDQDGSEIR SVELERLTAE GMTLIERRNT IEFFRDQAAE HFVRHTGSHW HPRSGSMVNH
RALTSAVIDS RDFIAARRRA ETEVLLPAGP KIAVTGGLNF NDHRLIWDKL DQVHAKHPDM
VLLHGGSPKG AERIAARWAD HRKVPQIAFK PDWTKHAKAA PFKRNDQMLD VLPIGVMVFP
GTGIQENMAD KARKLGIPVW KFGERGA