| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3905 |
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| Symbol | |
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| ID | 3969268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4336631 |
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| End bp | 4337536 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637927008 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_533750 |
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| Protein GI | 90425380 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCGT CCGATCGCAT CCTCTCTGTT TTTTCTGTAC GCGATCTGAA TGCGGGTCAT
TCCTTCCTCC CGGCCAATGC CCGCATCGCT ATCGTGCGCA TGACAGGCGC CAAGCGGCGT
TCAGGCCGAG GGATTTCTGG CCTGCAGCCG AAGGCGGCGA TCATCCGGCT ACGTCGCCGA
CTTGCCGGTA CGATGGTTTG GATCTTCGCG ATTCTCGCAT CATCGCTGTC GTGCAATGGT
GTTGCTTGCG CCGACCAGCC AGCACGCGGC ACGCAGACCG CAAGTCAACC GCTTGCCGAC
TCCCTTGCGC CGTTTATCAC CGAGGCCTCC GAACGGTTTG CGATCCCGGA ACGCTGGATC
CGTGCGGTGA TGCGGGCTGA GAGCTCTGGC AAGATGCGAG CCCGATCAGC GAAAGGCGCC
ATCGGGCTGA TGCAGATTAT GCCGGAGACG TGGACGGAAT TGCGTACGCG CTACGGTCTC
GGTGCTGATC CCTACGATCC GCACGACAAC ATCCTGGCTG GCGCTGCTTA TCTCCGCGAA
CTCCATGATC GGTACGGCAT GGCGGGATTT ATTGCCGCCT ACAATGCCGG TCCCCGACGT
TACGACGACC ATCTGGCGAC CGGGCGATCG TTGCCCGATG AGACGCAAGC CTACGTCGCG
GCGATCATGC CGATGATCGG GATCGAATTG TATGCTGTCG GGAGTGGCGT CATCACGACC
TCGCTAACGG TGGCACGCTG CCCCCTGTTT ATCATGCGCC CGGCAAGTAA CTCAACTGCT
GGTCGGACGT CGTCCGACGT GCGGCCTGAT GGTTCACTAA GTACCCGCGC CGTGGTCGAT
CTATCGGCGC TCGTGCCGCA ATCGAGCAAC CTATTTGCGC GCAGTGCCAG CTGGGTTCGA
CCGTGA
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| Protein sequence | MLPSDRILSV FSVRDLNAGH SFLPANARIA IVRMTGAKRR SGRGISGLQP KAAIIRLRRR
LAGTMVWIFA ILASSLSCNG VACADQPARG TQTASQPLAD SLAPFITEAS ERFAIPERWI
RAVMRAESSG KMRARSAKGA IGLMQIMPET WTELRTRYGL GADPYDPHDN ILAGAAYLRE
LHDRYGMAGF IAAYNAGPRR YDDHLATGRS LPDETQAYVA AIMPMIGIEL YAVGSGVITT
SLTVARCPLF IMRPASNSTA GRTSSDVRPD GSLSTRAVVD LSALVPQSSN LFARSASWVR
P
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