| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3893 |
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| Symbol | |
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| ID | 3969256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4323932 |
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| End bp | 4324936 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637926996 |
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| Product | conjugal transfer protein TrbG/VirB9/CagX |
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| Protein accession | YP_533738 |
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| Protein GI | 90425368 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.913527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGAAGT CACTGTTGTT GCGTCACGCT GCCTGGCCAG TCCTGCTACT GTCGGTTTCG
ATGGTTGCTG GCTGCACCAT CCCGCTGAAG CCTCCGCCGG ACATCTCCTA TGACATCGAG
GCACAGCCCG CCGTCCAGAT GCTGGATCCA CCGAAACCGG TCGAGATCGT GGAATTGCCG
ACGCCCTTGC CGCTGCCGGG TCAGTTGAAG CCGCTGAAGG GCGCGCGTTC AAAGCCTGAG
TCGCCCGACC CTCGTCAACG TGTCGAGAAG GCCAATGCCG CTGCGCGCGT TCAGCCCACT
CGCCACGGCT ACATCAATGC GGTGCAGGTC TATCCGTTCT CGTCCGGGGC GCTGTATCAG
GTCTATGCCG CGCCGGGTCA GGTGACCGAT GTTGCTCTGC AGGAAGGCGA GCAACTCGTT
GGCTCCGGGC CGGTCGCCGC CGGCGACACC GTGCGCTGGA TCATTGGCGA CACTGAAAGC
GGGGCAGGAC CGACCAAGCG GATTCATATC CTGATGAAGC CTACCAGACC CGACCTCGTC
TCCAATCTGG TCATCAACAC CGATCGCCGC ACTTATTTGC TTGAGCTGCG TTCCGCCGAG
AAGACCTATA TGGCCTCGGT GTCCTGGCAA TACCCACAGG ATCAGCTGAT TGCGCTGCGT
CGGCAGAATG CGAGCGCGGA AGCCGCGACC CCGATCGTGA CCGGCGTCGA CATATCGCGG
CTGCGTTTCC GCTACGCAAT CGAGGGTGAC AACCCACCCT GGCGTCCGCT CTCCGCCTTC
GATGACGGCT CCAAGGTCTA CATCGAGATG CCTAGCGGGA TAGCCCAGGG CGAGGCGCCG
CCGCTGTTCG TGATTGGCCC CGAAGGCGAG GGGCAACTAG TGAACTATCG CGTCCGGCAG
AACTATTACA TCGTCGATCG CCTGTTCGCC GCGGCGGAAC TGCGCATGGG CGGCGAGCAT
CAGCAGAGCG TCCGGATCAG CCGCACCGAC GGGAGAGGGC GATGA
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| Protein sequence | MMKSLLLRHA AWPVLLLSVS MVAGCTIPLK PPPDISYDIE AQPAVQMLDP PKPVEIVELP
TPLPLPGQLK PLKGARSKPE SPDPRQRVEK ANAAARVQPT RHGYINAVQV YPFSSGALYQ
VYAAPGQVTD VALQEGEQLV GSGPVAAGDT VRWIIGDTES GAGPTKRIHI LMKPTRPDLV
SNLVINTDRR TYLLELRSAE KTYMASVSWQ YPQDQLIALR RQNASAEAAT PIVTGVDISR
LRFRYAIEGD NPPWRPLSAF DDGSKVYIEM PSGIAQGEAP PLFVIGPEGE GQLVNYRVRQ
NYYIVDRLFA AAELRMGGEH QQSVRISRTD GRGR
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