| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3870 |
|---|
| Symbol | |
|---|
| ID | 3969369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 4301585 |
|---|
| End bp | 4302571 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637926976 |
|---|
| Product | endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_533718 |
|---|
| Protein GI | 90425348 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3568] Metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAATCCA GCGTTTTCTC GACTACCTTT CTTTTCCGTC AGCGTGTGCT GCACACTTTT
ATTTGCGTCC AATGCGAGGT TGCTCGCGAC GTCAAACGGC ACGGGCCACG AAATCAAAGC
GTTAAGGGGA AGAGAATGGG CACTCTGCGC GTGGGGTCGC TCAACACCGG GTTGTCGGTT
TGGAAGATCG ATCTTCAACA ATGGCGACTA AGAGCTGCGC AACTCTCGAA ACTGATTGGC
GATCTCTCGC TGGACGTAGT GCTACTCCAG GAAATCTGGC GTATCAAATG GGATGAGACG
ACCGATGAAA TGAAGACGTT CCTGACAGGC CTTGGATTGT CAGGAGATCA AAACAAGGAT
GACGTCCTTG CAGCCGCCTT GGGCAGCGGC TTTCAGGTCA GGTCATCTCT TGTCCCTTCA
TTTGATAGGG GGCGGCGAGA GCCTGGTCTG TATTGGGGAC TTACGATCGT GTCGCGATTT
CCAATCGAGC AGGTGGAGAA AAAGGAGTTA TCGTATTCCA AGTTCGATCG CTGGCCACGC
ATCGCGCAGT CTGGAAAGAT CAAACTGGCC AATGGCGATT CTTCGATTTT TGTCAATGTG
CACCTGCCCG CCGAGAGTCA CGAATCCCGC TTGGGGCTCG GCCTGGAAAC GCTTTCGTTC
TCCCGTTCGC TGGGTGCCCC GACTTTGTGC ATTGGAGGAG ACATGAACGC GGGGCCACAA
GCAGGTCCGG TCCAAATTTT TATGACGGAG TATTCTGACT GCTGGTCGAG CGGATCGACA
CGCGTTGTAA AATTTGAAGG CAACGAGTCG CGAGCCGGCA GCGCGCTGTA TCGAACGGTC
GCAGAAGGAC GAATCGATTA CCTTCTGGCG GACAAGATGG CTCGTATCAC CTCCTCGACC
TATCTGTATG GTGATTACGG CAGCGCTCCA CTCTCCGATC ATCCCTTCGT CATCGCGGAA
ATCGAATCGG CTCCCGGCGC CGAATAG
|
|---|
| Protein sequence | MQSSVFSTTF LFRQRVLHTF ICVQCEVARD VKRHGPRNQS VKGKRMGTLR VGSLNTGLSV
WKIDLQQWRL RAAQLSKLIG DLSLDVVLLQ EIWRIKWDET TDEMKTFLTG LGLSGDQNKD
DVLAAALGSG FQVRSSLVPS FDRGRREPGL YWGLTIVSRF PIEQVEKKEL SYSKFDRWPR
IAQSGKIKLA NGDSSIFVNV HLPAESHESR LGLGLETLSF SRSLGAPTLC IGGDMNAGPQ
AGPVQIFMTE YSDCWSSGST RVVKFEGNES RAGSALYRTV AEGRIDYLLA DKMARITSST
YLYGDYGSAP LSDHPFVIAE IESAPGAE
|
|---|
| |