| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3857 |
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| Symbol | |
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| ID | 3969124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4283377 |
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| End bp | 4286253 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926967 |
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| Product | putative monovalent cation/H+ antiporter subunit A |
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| Protein accession | YP_533709 |
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| Protein GI | 90425339 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
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| TIGRFAM ID | [TIGR00943] monovalent cation:proton antiporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTTG CCCTGATTGT TTTGATTCCG CTGGCCGGCG CGACGCTGCC AATGCTCACA
ATTCGGGCTG GGCGGAACGT CTGCACGATT GTGACCGCCA CGACCAGCCT TTGCGCTCTT
CTGGTGCTGT TGGCGAATGG CGCTGCGGTC TACGAAGGGG AAACGATCCG CGCCGGCGCC
GATTGGGTGC CGGCGATCGG CTTGTCGTTT CGGTTCTTCC TCGATGGTCT CGGCCTGTTC
TTCGCCGCGC TGATCCTGAC CATCGGGGTG CTGGTGATCA TCTATTCCCG CTTCTATCTC
GGACGCGCGG ATTCGATGGG GCGGTTCTTC GCCTATCTGC TTTTGTTCCA GGCGGCGATG
CTCGGTATCG TCATTAGCGA CAATGTGCTG CTGCTGGTGG TGTTCTGGGA GCTCACCAGC
CTGAGTTCGT TCCTGCTGAT CGGCTATTGG CATCATCTAC CGGAGGGGCG GCAGGGCGCG
CGGATGGCGC TTGTGGTGAC CGGCGGCGGC GGGCTGTTGC TGATGGCGGG CATGTTGCTG
CTCGGGCAGG CCGCCGGCTC CTACGAACTG ACCGAGATCC TGCAGCGCGG CGACACGGTC
AAGGCATCGC CGCTCTACGT CCCGATCCTG CTCCTGGTGC TCGGCGCGGC GTTCACTAAA
TCGGCGCAGT TTCCTTTCCA CTTCTGGCTG CCTCACGCCA TGGCGGCGCC GACGCCGGTC
TCGGCCTATC TGCACTCCGC CACCATGGTG AAGGCCGGCG TGTTTCTGCT GGCGCGGCTG
TGGCCGGTGC TCGCCGGCAC CGAGCCCTGG TTCATGATCG TCACCAGCAC CGGGCTGCTG
ACGATGCTGG TCGGCGCCTG GATCGCGCTG TTCAAGGATG ACCTCAAGGG GATCCTGGCG
CATTCCACCG TCAGTCATCT CGGGCTGATG ACGATGCTGC TCGGCTTCGG CACCCGCACT
GCGGTGATCG CTTGCATGTT TCACATCCTC AACCATGCAA CCTTCAAGGC GGCGTTGTTC
ATGAGCGCCG GCATCGTCGA CCACGAGACC GGCACCCGCA GCATCCGCAA GCTCGGCGGG
CTGCTGCGGC CGATGCCGAT CAGCGCGCTG CTGGCGTTGA CTGCCGCGGC TTCGATGGCC
GGTGTGCCGC TGCTCAACGG TTTTCTGTCG AAGGAGATGA TGCTCGAGGC GGCTGCCGAT
ACCAGCATTC TGGGCAACGC CTGGATCGTG CCGGCGGCGG CGACGCTCGG CGCGCTCTTG
TCGGTGGCCT ATTCGGCGCG TTTCGCGTTT TCGACCTATC TGGGATCGCG CTGCGACGTC
CTGCCGAAGA CGCCGCACGA TCCGCCGTTC GGCATGTGGG CGCCGGTCGC AGCCCTGGTG
ATACCGGTGA TTGCGATCGG TTTGTGGCCG CAATTGCTGG CGGGTGCGCT GGTCGAGCGC
ACCGCGCAGG CGGTGGTCGG CGCCGCGACG CTTCCGTTCC AGCCGCTGGC GATCTGGCAC
GGCCTGACGC TGCCGCTGCT GATGAGCGGA ATCGCACTCA CCGGCGGTCT GGTGCTGTTG
ATCGCGTACA CCCCGTTGGA GAAGTTGCGG GGCTTGCTGC CGAGGCCCGA TGCCAAGACG
ATGTTCGATG CCGTGATAGC CATTGCCGCG CGGAGCGCGC GCTGGTTGAT GCGTCGGCTG
CATACCGAGT CGTTGCCTCG CTATCTCGGG GTGATCACAC TGACCATCCT CGCGGTCGGA
GGGATTGGCT TCTTCAGCGG CCGGCATGAT CCGGGCGGCC GTCCGATGTT GCCGGTCAAT
CTGCCGGCGC TGATGGCGTG GGTCCTGCTC GTGGCGACCA GCGTCGCGGT GATGGCGTTT
CATGCCCATC GCCTGCTGAC CCTGATCCTG AGCAGCGTGG TGGGCTTGGT CGTGTCGCTC
GCCTTCATGC AGTTCTCAGC GCCGGATTTG GCGCTGACGC AGATTTCGGT CGAGGTGGTG
ACGACGATCC TGTTGTTGCT GGCGCTCAAT CTATTGCCGA AGCTGACCCC GTCGGAGCCG
AGCCTGGCCC GGCGCATCCG CGATGGGACG ATCGCCGGCT GCGGAGGGTT GGCGGCCGCC
GCGATGGCCT ATGTCGTGAT GACGCGTGAC GTCAGCTCGA TTTCGGCCTT CCACTTGGCG
CAGTCCAAGC CGGGCGGCGG CGGCAGCAAC GTCGTTAACG TCATCCTGGT CGACTTCCGT
GGCTACGACA CCTTTGGCGA GATCGTGGTG CTGTGCATCG CGGCCCTGGT GATCTACGCG
CTGCTGAGCA ATGCGCTCGA AGGCGCCGCG GCGCGCCGGC TCGATGCGAT GCGCCAACGC
TACGAATCCG CCGATGCCCA CCCGCTGGTA CTCGTCGTGG CGGCCAGGGT GCTGCTGCCG
CTGGCGATGA CCGTCGGCAT CTACATGTTC TTCCGCGGGC ACAACCAGCC GGGAGGTGGG
TTCATCGCGG GATTGGTGGT TGCCACCGCG ATTATCATGC AATTCATGGC GAGCGGATAT
GCCTGGACCG CCGACCAGCG TCGGATCGAC GGCCACCGCC TGCTCGGTGC CGGGGTGCTC
ATCGCGGCGG CGACCGGCAT CGGCGCGCTT CTGTTCGGCC GGCCGTTCCT GACCAGCTAT
TTCGTCTATG TTCCGGTGCC ACTGATCGGC GAAGTGGAAC TGGCAACCGC CATGCTGTTC
GACCTCGGCG TGTTCCTCGC GGTGGTGGGG ACGGTGGTGC TGTCGTTGTC GCAGATTGCA
CGGGTCGAAC GCCGGGCCAA ACGCACCCCG GTGCCGGTTG GCCCATCCGA TATTCCGTTG
GTGCAGCGGC CGATAGTGCC GCCGCTGCCT ATCGCCTCCT ACGCCGAGAG GGATTGA
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| Protein sequence | MLLALIVLIP LAGATLPMLT IRAGRNVCTI VTATTSLCAL LVLLANGAAV YEGETIRAGA
DWVPAIGLSF RFFLDGLGLF FAALILTIGV LVIIYSRFYL GRADSMGRFF AYLLLFQAAM
LGIVISDNVL LLVVFWELTS LSSFLLIGYW HHLPEGRQGA RMALVVTGGG GLLLMAGMLL
LGQAAGSYEL TEILQRGDTV KASPLYVPIL LLVLGAAFTK SAQFPFHFWL PHAMAAPTPV
SAYLHSATMV KAGVFLLARL WPVLAGTEPW FMIVTSTGLL TMLVGAWIAL FKDDLKGILA
HSTVSHLGLM TMLLGFGTRT AVIACMFHIL NHATFKAALF MSAGIVDHET GTRSIRKLGG
LLRPMPISAL LALTAAASMA GVPLLNGFLS KEMMLEAAAD TSILGNAWIV PAAATLGALL
SVAYSARFAF STYLGSRCDV LPKTPHDPPF GMWAPVAALV IPVIAIGLWP QLLAGALVER
TAQAVVGAAT LPFQPLAIWH GLTLPLLMSG IALTGGLVLL IAYTPLEKLR GLLPRPDAKT
MFDAVIAIAA RSARWLMRRL HTESLPRYLG VITLTILAVG GIGFFSGRHD PGGRPMLPVN
LPALMAWVLL VATSVAVMAF HAHRLLTLIL SSVVGLVVSL AFMQFSAPDL ALTQISVEVV
TTILLLLALN LLPKLTPSEP SLARRIRDGT IAGCGGLAAA AMAYVVMTRD VSSISAFHLA
QSKPGGGGSN VVNVILVDFR GYDTFGEIVV LCIAALVIYA LLSNALEGAA ARRLDAMRQR
YESADAHPLV LVVAARVLLP LAMTVGIYMF FRGHNQPGGG FIAGLVVATA IIMQFMASGY
AWTADQRRID GHRLLGAGVL IAAATGIGAL LFGRPFLTSY FVYVPVPLIG EVELATAMLF
DLGVFLAVVG TVVLSLSQIA RVERRAKRTP VPVGPSDIPL VQRPIVPPLP IASYAERD
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