| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3855 |
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| Symbol | |
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| ID | 3969122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4281473 |
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| End bp | 4283008 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926965 |
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| Product | putative monovalent cation/H+ antiporter subunit D |
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| Protein accession | YP_533707 |
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| Protein GI | 90425337 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.771858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCACT TGGTGATCGC TCCCATCGTG CTGCCCGCGA TCGTGGCGTC GTTCCTGGTG
CTGGTGCTGC GGCATGATCT CGCCAGCCAG CGCATCGTAT CGGTAGCGGC GACGGCGCTG
TTGTTCGGTG TCGCCGTCTT GCTCTACGCA TCGTCCGGCG ACGGGGACCC GGCGCCGTAT
CAGCTCGGCG ATTGGCGGGC CCCGTTCGGG ATCGGGCTGG TGCTCGACCG GCTGTCAGCA
ACCATGCTGC TACTGACCGC GCTGCTCGCG GTCGCGGTCG TGATCTACGC CATGGCCGGC
TGGGACGGTC GCGGCCAGTA TTTTCATCCG TTGTTTCAGT TTCAACTGAT GGGCCTGAAC
GGCGCGTTTC TCACTGGAGA CCTGTTCAAC CTGTTCGTGT TCTTCGAGAT CATGCTGATC
GCCTCCTATG GCTTGATGTT GCATGGCGGC GGATCGCAAC GGTTGCGGGC CGGCTTCCAC
TATGTCGCGA TCAATCTGGT CGGGTCGACG CTGTTTCTGT TCGCGGTGGG GCTGATCTAT
GCCGTGACCG GAACGCTCAA CATGGCCGAC CTGGCCAACA AGGTGGCGCA GATCGCGCCC
GGCGACGAAG CGATCCTGCG CGTCGGCGCC TTGTTGCTGT TACTGGTGTT TGCGTTGAAG
GCGGCGCTGG TGCCGCTACA ATGGTGGCTG CCGACGGCCT ATGCGGCGGC GCCGGGGCCG
GTGGCGGCGC TGTTCATGAT GATGACCAAG GTCGGTGCCT ATTCGATCCT GCGGGTCTAC
ACCGTGGTGT TCGGCGCCGA GGCCGGCGCG GTGGCGGATA TTGCCGCCCC ATGGGTGGTG
CCGGCGGCGC TGGCGACGCT GGTGCTGGGC GCCGTCGGCG TGTTGGCGAG CCCGACCTTG
CGCGGGATGG TCTGTTTCTC GATCGTGTGG TCGATGGGAT CGCTGCTGTT GGCGCTCGGC
CTGTTCGACC AAAACGGCCT GTCCGCCGGG CTCTATTATC TGCTGCACTC AACGTTGAGC
GGCGCTGCGC TGTTTCTTCT CGTCGACCTC GTCAGCGCGC ACCGCGGCCA AGTCGACGAC
CGGCTGGTTC CGACCCCGTC GCTGCCCCAT GCCAACCTGT TCGCCGGCCT TTTCTTCGTG
GCGGCGATTG CGATGACAGG GATGCCGCCG CTGTCGGGGT TTCTCGGCAA ACTCCTGATC
CTTGACGCGA TCTGGGGAAG CCCCGTTGCC GTCGCGAGTT GGGTGATCCT GCTCGCCACC
AGTCTGGTGG TGATCGTCGG CTTCGCGCGT GCCGGCAGTA CGCTGTTCTG GAAGGTCGCC
CCCCGGCCGT CGGCGTTGGC CATGCCGGCG CAATCCATTG CGATCCCCGT TGCCGTGGTG
GTAGGCCTGC TGGGGATGAC CGTGCTGCTT GCGCTGTTCG CCGGCCCGGT CACCCGCGAA
CTGGCGGCGA CGGCGCGGCA GACGCTCGAC ACCAAGGCCT ATGTCCGCGC GGTGAACCCG
GCGCCGCTGG CGCTAACACG GAGTGAATCC AAGTGA
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| Protein sequence | MNHLVIAPIV LPAIVASFLV LVLRHDLASQ RIVSVAATAL LFGVAVLLYA SSGDGDPAPY
QLGDWRAPFG IGLVLDRLSA TMLLLTALLA VAVVIYAMAG WDGRGQYFHP LFQFQLMGLN
GAFLTGDLFN LFVFFEIMLI ASYGLMLHGG GSQRLRAGFH YVAINLVGST LFLFAVGLIY
AVTGTLNMAD LANKVAQIAP GDEAILRVGA LLLLLVFALK AALVPLQWWL PTAYAAAPGP
VAALFMMMTK VGAYSILRVY TVVFGAEAGA VADIAAPWVV PAALATLVLG AVGVLASPTL
RGMVCFSIVW SMGSLLLALG LFDQNGLSAG LYYLLHSTLS GAALFLLVDL VSAHRGQVDD
RLVPTPSLPH ANLFAGLFFV AAIAMTGMPP LSGFLGKLLI LDAIWGSPVA VASWVILLAT
SLVVIVGFAR AGSTLFWKVA PRPSALAMPA QSIAIPVAVV VGLLGMTVLL ALFAGPVTRE
LAATARQTLD TKAYVRAVNP APLALTRSES K
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