| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3854 |
|---|
| Symbol | |
|---|
| ID | 3969121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 4280988 |
|---|
| End bp | 4281476 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637926964 |
|---|
| Product | putative monovalent cation/H+ antiporter subunit E |
|---|
| Protein accession | YP_533706 |
|---|
| Protein GI | 90425336 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.911749 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGAAGG TGCTACCCCA TCCGGTTTTG ACGCTGGTGA TCGCCGGGGT CTGGGTCGCG
CTGATCAATT CGATCTCGCT GGGCGGCGTG CTGTTCGGCT TGGTGCTGGG GATCGCAATC
CCGTTGTTCA CCAACCCGTA TTGGCCGGTG CGGCCGACCA TCCAAAATCC ACTCAAGATT
GCCGAGTACC TGGCTGTCGT TGGCTGGGAT ATCGTGGTCT CCAATGTGCA GGTGGCTTAC
TGGGTGCTGT TCTGGCCGAG CCGCAGCTTG CAAACCCAAT TCGTCGTGGT GCCGCTCGAC
CTTGCCTCGC CCGAAGCCAT TGCCTTGCTT GCGGGAACGA TCACCATGAC GCCGGGCACC
GTCAGCGCGG ACCTGGCGGC CGACGGCAGC GCCATTCTGG TGCACTGTCT GCATACGACG
GATCCCGAGG CGGTGGTGCG CCAGATCAAG ACCCGCTACG AACGACGATT GAAGGAGATC
TTCGCATGA
|
|---|
| Protein sequence | MTKVLPHPVL TLVIAGVWVA LINSISLGGV LFGLVLGIAI PLFTNPYWPV RPTIQNPLKI
AEYLAVVGWD IVVSNVQVAY WVLFWPSRSL QTQFVVVPLD LASPEAIALL AGTITMTPGT
VSADLAADGS AILVHCLHTT DPEAVVRQIK TRYERRLKEI FA
|
|---|
| |