Gene RPC_3848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3848 
Symbol 
ID3969461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4276185 
End bp4276667 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content66% 
IMG OID637926958 
Producthypothetical protein 
Protein accessionYP_533700 
Protein GI90425330 
COG category[S] Function unknown 
COG ID[COG4244] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGA CGATTCTCGA AGAGGTCGGC GAATTCGAAA CCACCTCCAT CGTGGCCCTC 
GCTGGCCACC CGATCCATGC GATGCTGGTT TCGTTTCCCA TCGCCCTGGT GATCTCGACG
CTGGGCTGCG ATATCTTCTA CTGGTGGGGC GGCGATCCGT TCTGGGCGCG CGCCGGGCTG
TGGGCGAGCG GCTTCGCGTT CTGGTTCGGC GTTGCGGCCA GTCTGGCCGG CACCGCGGAG
TTGCTGCTGG TCAAGGGCAT CCGCAAGCGC GCGGCAAGCT GGATCCATGC CACCGCCGGC
GTCATGCTGG TCTCGGTCGC GGGCGCCAAT TGGGGATTGC GGCTGGTCGA TCATCTGAAC
GTGCTGCCGG TCGGCCTGAT GGTCTCGGCG CTCGGCACGG TGTTCGTCGC CATTGCGGGC
TGGCACGGCG GCAAGCTGGT GTTCGATCAC GGCGTCGGCC TGATGGTGTC GACGAAGGAT
TGA
 
Protein sequence
MPKTILEEVG EFETTSIVAL AGHPIHAMLV SFPIALVIST LGCDIFYWWG GDPFWARAGL 
WASGFAFWFG VAASLAGTAE LLLVKGIRKR AASWIHATAG VMLVSVAGAN WGLRLVDHLN
VLPVGLMVSA LGTVFVAIAG WHGGKLVFDH GVGLMVSTKD