| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3837 |
|---|
| Symbol | |
|---|
| ID | 3969450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 4268952 |
|---|
| End bp | 4269428 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637926948 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_533690 |
|---|
| Protein GI | 90425320 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.752955 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCAAGA ACCTTGATGA AATCGATCTG AAGATCCTCG GCGAGATCCA GGCCGATGGC
CGAATAACCA ATGTCGAACT GGCCAAGCGA GTCGGCATTT CGCCGCCGCC TTGCCTGCGG
CGGGTGCGGA CCCTGGAAGA GGAAGGTTAC ATCCAGGGTT ATCGCGGCCT GCTGGATCCC
GGGCGGCTCG GCTTCGACGT CACGGTGTTT GCCTCGGTGC ATCTGGCGAG CCAGGCCGAA
GCCGATTTGC GCGGCTTCGA GGAATTCGTC CGCAATCAGC CGTTAGTGCG AGAATGCTGG
ATGTTGTCCG GCGAAGTCGA TTTCATTTTG AAATGCGTCG CGCCCGACAT GGCGACGTTC
CAGCATTTCG TCGCGCATCT CACCGCCGCG CCGCACGTGC GGAACGTACG GACCTCGCTA
GTGCTGCGCA ATTCGAAATA CGCCGCCGCG GTGCCGCTGG AATTGAAGGT GAGCTAG
|
|---|
| Protein sequence | MSKNLDEIDL KILGEIQADG RITNVELAKR VGISPPPCLR RVRTLEEEGY IQGYRGLLDP
GRLGFDVTVF ASVHLASQAE ADLRGFEEFV RNQPLVRECW MLSGEVDFIL KCVAPDMATF
QHFVAHLTAA PHVRNVRTSL VLRNSKYAAA VPLELKVS
|
|---|
| |