| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3835 |
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| Symbol | carB |
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| ID | 3969448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4264510 |
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| End bp | 4267974 |
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| Gene Length | 3465 bp |
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| Protein Length | 1154 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926946 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_533688 |
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| Protein GI | 90425318 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.863015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.842487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACTGATAT ATCGACGATT CTCATCATCG GCGCCGGCCC GATCGTGATC
GGCCAGGCCT GCGAATTCGA CTATTCCGGC ACCCAGGCGG TGAAGACGCT GAAGGACGAG
GGCTACCGCA TCGTCCTGGT CAATTCCAAT CCGGCCACCA TCATGACCGA CCCGGAATTG
GCGGACGCGA CCTACATCGA GCCGATCACC CCGGAGATCG TCGCCAAGAT CATCGAGAAG
GAACGCCACG TCATTCCCGG CGGCTTCGCG CTGTTGCCGA CGATGGGCGG GCAGACCGCG
CTGAACTGCG CGCTGAGCCT GCGCAAGCAG GGCACGCTGG AGAAATTCGA CGTCGAGATG
ATCGGCGCCA CCGCCGACGC CATCGACAAG GCCGAGGACC GCCAGCTGTT CCGCGAGGCG
ATGACCAAGA TCGGGCTGGA GACGCCGAAG TCGCGGCTCG CCAACGCCAC CGCTTTGAAG
AAGGCCTATC GCGAGAAATA TCTCGAAGAC CGCGCCAAAC TGTCCGGCGA GGAGCTGGTC
GCCTTCGAAC GGCAATGGGT GCTCGGCGAA AGCGATCGCC GCAAGCGCTA CCAGGAACAG
GCGCTCGGTT CGGCCCTGAT GGCGTTGTCC GAGATCGGCC TGCCGGCGAT CATCCGGCCG
TCGTTCACCA TGGGCGGCAC CGGCGGCGGC ATCGCCTACA ACAAGGAAGA ATTCCTCGAC
ATCATCGAGC GCGGGCTCGA CGCCTCGCCG ACCAACGAAG TCTTGATCGA AGAATCCGTG
CTCGGCTGGA AAGAGTACGA GATGGAGGTG GTGCGCGACA AGAACGACAA CTGCATCATC
GTCTGCTCGA TCGAGAACCT CGACCCGATG GGCGTGCACA CCGGCGATTC GATCACGGTG
GCCCCCGCGC TGACGCTGAC GGATAAAGAG TATCAGATCA TGCGCGACGC CTCATTGGCG
GTGCTGCGCG AGATCGGCGT CGAGACCGGC GGCTCCAACG TGCAGTTCGG CGTCAATCCG
GCCGACGGCC GCATGGTCGT GATCGAAATG AATCCGCGGG TGTCGCGCTC CTCGGCGCTG
GCCTCGAAGG CCACCGGCTT TCCGATCGCC AAGGTCGCCG CCAAGCTGGC GGTCGGCTAC
ACGCTCGATG AGATCGCCAA CGACATCACC GGCGGCGCCA CGCCGGCGTC GTTCGAGCCG
ACCATCGACT ACGTGGTCAC CAAGATTCCG CGCTTTGCGT TCGAGAAATT CCCCGGCGCC
AGCCACACCT TGACCACCTC GATGAAGTCG GTCGGCGAAG TGATGGCGAT CGGTCGCACC
TTCCAGGAAA GCTTGCAGAA GGCGCTGCGC GGGCTGGAAA CCGGCCTCAC CGGGCTCGAC
GAGATCGAGA TCGAAGGATT GGGCCGCAGC GACGACAAGA ACGCGATCCG CGCCGCGCTC
GGCACGCCGA CCCCCGACCG GCTGCTGCAG GTCGCGCAGG CGATGCGGCT CGGCTGGACC
GACGAGGAGA TCTTCACTTC CTGCAAGATC GATCCCTGGT TCCTGTCGGA ATTGCGCGGC
ATCGTCGAGA TGGAAGCCAA GGTCAAGGCC AGCGGCCTGC CCGGCAACGC CTTCGGCATG
CGCACGCTGA AGGCGATGGG CTTCTCCGAC GCAAGGCTCG CGGTGCTGGC CAAGACCACC
GAAGCCGACG TCAAAGCCCA GCGCCACGCG CTCGGCGTCC GTCCGGTGTT CAAGCGGATC
GACACCTGCG CGGCGGAATT CGCCTCGCCC ACCGCCTATA TGTATTCGAC CTACGAGTCG
CCGTTCGCCG GCCCCCCCGC CGACGAAAGC GCGCCGTCCG ACAAGAAGAA GGTGATCATC
CTCGGCGGCG GTCCGAACCG CATCGGCCAA GGCATCGAGT TCGATTACTG CTGCTGCCAC
GCCTGCTTCG CGCTGCACGA CGCCGGCTAT GAATCGATCA TGATCAACTG CAACCCGGAA
ACCGTGTCGA CCGACTACGA CACCGCGGAC CGGCTGTATT TCGAGCCGTT GACCGCCGAG
GACGTGCTGG AGATCATCGA CACCGAGAAG CGCAACGGCA CGCTGCACGG CGTCATCGTG
CAGTTCGGCG GCCAGACCCC GCTGAAGCTG GCGCGGGCGT TGGAAGCCGC CGACGTGCCG
ATCCTCGGCA CTTCGCCGGA CGCCATCGAT CTGGCCGAAG ACCGCGACCG CTTCAAGCGC
GTGCTCGACA AGTTGAAGCT GAAGCAGCCG AAGAACGGCA TCGCCTATTC GGTCGAGCAG
GCGCGCCTGG TCGCCGCCGA ACTCGGCCTG CCGCTGGTGG TGCGCCCGTC CTATGTGCTC
GGCGGCCGCG CCATGCAGAT CATCCGCGAG GAATCCCAGC TCGGCGATTA CCTGCTCGGC
ACCCTGCCCG AACTGGTGCC CGCCGACGTC AAAGCCCGCT ATCCGAACGA TAAGACCGGG
CAGATCAACA CCGTGCTCGG CACCAATCCC TTGTTGTTCG ACCGCTATCT GTCCGACGCC
ATCGAGATCG ACGTCGACTG CCTGTGCGAC GGCAAGGATA CTTTCATCGT CGGCATCATG
GAGCACATCG AGGAGGCCGG CATTCACTCC GGCGACTCGG CCTGCTCGCT GCCGCCGCAT
TCGCTCGACG CCCCGATGAT CGCCGAACTG GAGCGGCAGA CCCGCGACAT GGCGCTCGGC
CTCGACGTCG TCGGGCTGAT GAACGTGCAA TTCGCCATCA AGGACGGCGA CATCTACGTG
CTCGAGGTCA ACCCGCGGGC GTCGCGCACC GTGCCGTTCG TCGCCAAAGT GGTGGGCATT
CCGGTCGCCA AGATCGCCGC GCGGCTGATG GCCGGCGAAA AGCTGGTCGA TTTCAAGCTC
GCCAAGCGCA AGCTCGACCA TGTCGGCGTC AAGGAATCGG TGTTCCCGTT CGCCCGCTTC
CCCGGCGTCG ACACCGTGCT CGGCCCGGAG ATGCGCTCCA CCGGCGAGGT CATGGGGATC
GACCGCTCGT TCGAAATCGC CTTCGCCAAG AGCCAGCTCG GCGGCGGCAC CCGCGTGCCG
CGCAAGGGCA CCGTGTTCGT CTCGGTGCGC GAGGGCGACA AGACCCGGAT TCTCGACGCC
GTGAAGCTGT TGTGCTCGCT CGGCTTCAAG GTGCTGGCGA CCTCCGGCAC CCAGCGCTTC
CTCGCCGACC ACGGCGTCCC CGCGGAAAAG GTCAACAAGG TGTTGGAGGG CCGGCCGCAT
ATCGTCGACG CCATCACCAA TGGCGAGATC CAGCTGGTGT TCAACACCAC CGAAGGCCCG
CAGGCGTTGG CCGACAGCCG GTCGCTGCGT CGCGCTGCCC TCTTGCATAA AGTTCCGTAT
TACACCACTC TTTCGGGCGC GGTCGCCGCC GCGCAGGGCA TCCGGGCCTA CCTTGGTGGG
GACCTTGAGG TCCGTACCCT GCAGAGTTAC TTTTCCGACA CCTGA
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| Protein sequence | MPKRTDISTI LIIGAGPIVI GQACEFDYSG TQAVKTLKDE GYRIVLVNSN PATIMTDPEL
ADATYIEPIT PEIVAKIIEK ERHVIPGGFA LLPTMGGQTA LNCALSLRKQ GTLEKFDVEM
IGATADAIDK AEDRQLFREA MTKIGLETPK SRLANATALK KAYREKYLED RAKLSGEELV
AFERQWVLGE SDRRKRYQEQ ALGSALMALS EIGLPAIIRP SFTMGGTGGG IAYNKEEFLD
IIERGLDASP TNEVLIEESV LGWKEYEMEV VRDKNDNCII VCSIENLDPM GVHTGDSITV
APALTLTDKE YQIMRDASLA VLREIGVETG GSNVQFGVNP ADGRMVVIEM NPRVSRSSAL
ASKATGFPIA KVAAKLAVGY TLDEIANDIT GGATPASFEP TIDYVVTKIP RFAFEKFPGA
SHTLTTSMKS VGEVMAIGRT FQESLQKALR GLETGLTGLD EIEIEGLGRS DDKNAIRAAL
GTPTPDRLLQ VAQAMRLGWT DEEIFTSCKI DPWFLSELRG IVEMEAKVKA SGLPGNAFGM
RTLKAMGFSD ARLAVLAKTT EADVKAQRHA LGVRPVFKRI DTCAAEFASP TAYMYSTYES
PFAGPPADES APSDKKKVII LGGGPNRIGQ GIEFDYCCCH ACFALHDAGY ESIMINCNPE
TVSTDYDTAD RLYFEPLTAE DVLEIIDTEK RNGTLHGVIV QFGGQTPLKL ARALEAADVP
ILGTSPDAID LAEDRDRFKR VLDKLKLKQP KNGIAYSVEQ ARLVAAELGL PLVVRPSYVL
GGRAMQIIRE ESQLGDYLLG TLPELVPADV KARYPNDKTG QINTVLGTNP LLFDRYLSDA
IEIDVDCLCD GKDTFIVGIM EHIEEAGIHS GDSACSLPPH SLDAPMIAEL ERQTRDMALG
LDVVGLMNVQ FAIKDGDIYV LEVNPRASRT VPFVAKVVGI PVAKIAARLM AGEKLVDFKL
AKRKLDHVGV KESVFPFARF PGVDTVLGPE MRSTGEVMGI DRSFEIAFAK SQLGGGTRVP
RKGTVFVSVR EGDKTRILDA VKLLCSLGFK VLATSGTQRF LADHGVPAEK VNKVLEGRPH
IVDAITNGEI QLVFNTTEGP QALADSRSLR RAALLHKVPY YTTLSGAVAA AQGIRAYLGG
DLEVRTLQSY FSDT
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