| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3822 |
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| Symbol | |
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| ID | 3969281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4252493 |
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| End bp | 4253704 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637926932 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_533675 |
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| Protein GI | 90425305 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGCG TCCCGACCCT GTGGGTGGTT GTCGTCGTCA ACTTTCTGGC GCTGGGTCTG
GTCTGGACCT ATGTGACGCG CAACTATCCG AACTTCATCG CGGCGCCGTA CTGGACCGCG
GCGGCGTTCG TCGCCGCATC GGCCGCGGCC GTCGCGCTGT TGCGCGGCGT GTTCGATTCG
GCGCTGCCGC AGGTGTTCGG CAGCACCATG ATGATCATGG CCTGCTGCCT CGGCAGCATG
GGCATGGACC GCTTCTTCGA CCATCCGGCA CGATGGCGGA TCACCTGGAG CATCGTCGGA
CTGAGCGTCG CCGCGTTCAG CTATTTCAGC TTCATCCATG TCAGCATGCC GATGCGCATG
GTGGTGTATT CGATCGGCGA GTCGGTGCCG CTGGCGCTGT CGCTGCGCCA CGTGATGTGG
CGGCAGGACA AGCAATGCTA CCCCGGTTCC CGCATGACCG CCGCGATTGC CGGCGCGATG
ATCGTGGTGT TGATCGTGCG CTCGATCGCG GCGCTGACCG GCATCGGCGG CGAACTCACG
GTCCTGCACT TCAATGCCTT CCAGGCCGTC ATGGTGCTGC TGCTGGTGTT CTTGTCGATG
ATGTGGTGCT TCGGCTTCCT GCTGATGACG ATCGATCGGT TGCGCGCCGA GGTGGCGAAG
CTCGCGATGC TGGACGACCT GACCGGCGCC GCCAACCGCC GCCAATTGCT GCAGCGCCTG
GAAGAGGAAT GCGCGCTGTC GCGGCGCACC GGCGGGCCAT TCGCGCTGCT GGCGATCGAC
CTCGACGGCT TCAAGGCGAT CAATGACGGC TACGGCCACG GCACCGGCGA CGCCTGCCTG
CGCGACTTCA CCCGCACCGC GCAGAGTTGC CTTCGCCCCG GGGATCTGTT GGCGCGGCTC
GGTGGCGACG AGTTTTCGGT GCTGCTGCCG GCGACCACGC TGCGCGAGGG CGCGATGATC
GCCCGCCGGA TCCTGGAAGC CTGCCGGGGA ACCGGCCAGG GCACCGCGAT CACGCTGTCG
GTGTCGATCG GCGTCGCGCA GTGGACCAAG CTGGTCGGTG CCGACGCCGA ACGGCTGATC
GCGGCCGCCG ACCATGCGCT TTACGCCGCC AAGCACGGCG GCAAGAATCG CCACGCGGTC
TATGATCCCA CGGTCGACCA TCCGGTGAAC GCAGCGTTCG ACGGAATGCC GCCGCTGCGC
AAGACCGCAT AA
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| Protein sequence | MLSVPTLWVV VVVNFLALGL VWTYVTRNYP NFIAAPYWTA AAFVAASAAA VALLRGVFDS
ALPQVFGSTM MIMACCLGSM GMDRFFDHPA RWRITWSIVG LSVAAFSYFS FIHVSMPMRM
VVYSIGESVP LALSLRHVMW RQDKQCYPGS RMTAAIAGAM IVVLIVRSIA ALTGIGGELT
VLHFNAFQAV MVLLLVFLSM MWCFGFLLMT IDRLRAEVAK LAMLDDLTGA ANRRQLLQRL
EEECALSRRT GGPFALLAID LDGFKAINDG YGHGTGDACL RDFTRTAQSC LRPGDLLARL
GGDEFSVLLP ATTLREGAMI ARRILEACRG TGQGTAITLS VSIGVAQWTK LVGADAERLI
AAADHALYAA KHGGKNRHAV YDPTVDHPVN AAFDGMPPLR KTA
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