Gene RPC_3819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3819 
Symbol 
ID3969278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4250960 
End bp4251550 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content60% 
IMG OID637926929 
Producthemerythrin HHE cation binding region 
Protein accessionYP_533672 
Protein GI90425302 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAA TGATCGAAAT TCTGCAGGAA GAGCATCGCA ACATCACCAG GCTGCTCAAT 
GTGCTGGAGC AGGAACTGAA GGTGTTCGAT CGCCGCGAGC GGCCGGATTA CGAGATCTTT
CAGGCGATCA TTCAGTATTT CCAGGAGTTC CCTGACCGCT GCCACCATCC CAAAGAGGAT
GTGGTGTTCG ATATTCTGAA GCAGCGCAAT CCGGCGGTGG CCGCGGCGGT GGGCGACGTT
CAATCCGAGC ACCGGCTCGA GGCCGAGCGG CTGCGCCGGT TTTCGCAGAT GATCGACGAT
ATTCTCGCCG ACCAGGAGAT TCCGCGGCAG ACCGTCCACA TCGCCGCGGA GGATTTCATC
GATCATCAGC GCCGCCACAT GGCCAAGGAA GAGCATCTGC TGTTTCCGGC TGCGCTGGAG
ACGCTGACCG CGGCGGATTG GGCGAAGATC GACGCCCGCG TCGACGACCG CAAAGACCCG
ATGTTCGACG GCGCCGTCGA AGCCAGGTTC CAAAACCTTC ACAGCACCAT TCTGCGCTGG
GAGAAAGAAA CCGAGGAACA GCGGCTGAAG ATGAGCCCGG CGCAGGGCTG A
 
Protein sequence
MSKMIEILQE EHRNITRLLN VLEQELKVFD RRERPDYEIF QAIIQYFQEF PDRCHHPKED 
VVFDILKQRN PAVAAAVGDV QSEHRLEAER LRRFSQMIDD ILADQEIPRQ TVHIAAEDFI
DHQRRHMAKE EHLLFPAALE TLTAADWAKI DARVDDRKDP MFDGAVEARF QNLHSTILRW
EKETEEQRLK MSPAQG