| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3818 |
|---|
| Symbol | |
|---|
| ID | 3969277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 4248098 |
|---|
| End bp | 4250785 |
|---|
| Gene Length | 2688 bp |
|---|
| Protein Length | 895 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637926928 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_533671 |
|---|
| Protein GI | 90425301 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG2217] Cation transport ATPase
[COG3350] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGA CCAACGACGG GGCGAATGAG CAGACCCGCA GCTGTTGCGG CGGCATGGCC
AAAGCAGATC GGCCCAACGC GGCGTCGCGA CCGGACTTGG TTCAACTCAC CGACTTGACC
CAACACCCCC GCGCCACCGC GGCCAAAGCG ATCGATCCGG TGTGCGGCAT GAGCGTCGAC
ACCAGCGCCG GCAAGCCGCA ATTCGACTAT CAAGGAACGA CCTATCACTT CTGCTGCAAA
GGCTGCCGCA GCAAATTCGC CACCGATCCC GAGAGCTATC TCGCCAAGCA ACGCGACGCC
AAAACCGCCG CGATGTCGTC CTGTTGCGGC GGCACGGACG ACCATGTCGG CCACGGCCAC
GCGCATCACG ATCACGCGCA GCATGCGCCG GCCGCGGCGC TGGCGATCGA TCCGGTGTGC
GGCATGAACG TCGACACCAG TGCCGGCAAG CCGCAATTCG ACTATCACGG CACCACCTAT
CACTTCTGCT GCAACGGCTG TCGCAGCAAG TTCGCCGCCG ATCCGGAGAG CTATCTCGAC
AAGAGCAAAG CCAAGCCGCA GCCCGCGGCG CCCGAAGGCA CCATCTACAC CTGCCCGATG
GACCCGCAGA TCCGCCAGGT CGGCCCCGGC AGCTGCCCGA TCTGCGGCAT GGCGCTGGAA
CCCGAACTGG TGACGCTGGA CGCCGCGCCG AACGCAGAAC TGATCGACAT GACGCGGCGG
TTCTGGATTG GCCTCCTGCT TTCGCTGCCG GTGGTGGTGC TGGAAATGGG CGGCCATCTC
GCCGGCGAAC ACAATTGGGT CGATCCGACG CTGTCGAACT GGATTCAATT CGCGCTGGCG
AGCCCGGTGG TGCTGTGGGC CGGCTGGCCG TTCTTCGTGC GCGGCGTGCA ATCCTTGATC
ACCCGCAACC TCAACATGTT CACGCTGGTC GCGATGGGCA CCGGCGTAGC CTATCTCTAC
AGCCTCGTCG GCACGCTTCT GCCGCAGGCG TTTCCCTCCG CGTTTCGCAG CCATGGCGGC
GCAGTGCCGG TTTATTTCGA AGCCGCCGCG GTGATCACCG TGCTGGTGCT GCTCGGTCAG
GTGCTGGAGC TGCGCGCCCG CGACGCCACC TCCGGCGCCA TCAGGGCGCT GCTCGGCCTC
GCGCCGCGCA CCGCGCGGCG GATCGATGAT GCGGGAGCCG ACCACGAGGT CGAGATCGAC
GCCCTCGTCG TCGGCGACAA GGTCCGGGTG CGGCCCGGCG AAAAGGTCCC GGTCGACGGC
GTGATTTTGG AAGGCCGCGC CACGCTCGAC GAATCGCTGG TCACCGGCGA ATCGCTGCCG
GCGACGCGCG AGATCGGCGA CCAGGTGATC GCCGGCACGC TCAGCCAGTC CGGCGGTTTC
GTGATGCGCG CCGAACAGGT CGGCCGCGAC ACCGTGCTGT CGCGGATCGT GCAGATGGTG
GCGCAGGCGC AGCGCTCGCG CGCACCGATC CAACGCGTCG CCGATCAGGT CGCCGGCTGG
TTCGTGCCCG CCGTGATCGC GGTGGCGATC ACCGCGTTCT TCGCCTGGTC GGCGTTCGGC
CCCGAACCGC GGCTGACCTA CGCGTTGGTT GCCGCCGTCA GCGTGCTGAT CATCGCCTGC
CCCTGCGCGC TCGGCCTCGC CACGCCGATG TCGATCATGG TCGGCGTCGG CCGCGGCGCC
CAAGCCGGCG TGCTGATCCG CAACGCCGAA GCGTTGGAGC GGATGGAAAA GGTCGACACT
CTGGTGGTCG ACAAGACCGG CACCCTCACC GAAGGCAAGC CGAGCGTGGT GGCGATCGTC
GCCGCCGACG GCTTCGACGA GACCACGATC CTGCGGCTCG CCGCCAGCGT CGAGCGCGCC
AGCGAGCACC CCTTGGCCGA CGCCGTTTTG CGCGCCGCCA AGGAGCGGCA AATCGAACTC
TCCAAGGTCG AGGAGTTCGA TGCGCCGAGC GGCAAGGGTG CCACCGGCAA GGTCGACGGC
AAGACCGTGC TGCTGGGGAA CGCCGTGCTG CTGAGTTCTG CCGGCGTCGA CAGCCGCGCG
CTGGACGACC GCGCCGAGCA ATTGCGCGGC GACGGCGCGA CCGTGATCAA CATCGCGATC
GACGGCCGAC TCGCCGGGCT GTTCGCGATC GCCGATCCGG TCAAGGCCTC GACGCCGGAC
GCGTTGAAGG CGATGGCCGC GGAAGGCATC AAGGTGATCA TGCTGACCGG CGACAACCGC
ACCACCGCTG AGGCCGTGGC GCGCAGGCTG GGAATCGCCG AGGTCGAAGC CGAAGTGCTG
CCGGCGCAGA AGAGCGCGGT GGTGGAGAAG CTGCGCCGTG CCGGTCGAAT CGTCGCGATG
GCCGGCGATG GCGTCAACGA CGCCCCTGCC CTCGCCGCGG CCGACGTCGG CATCGCGATG
GGCACCGGCA CCGACGTGGC GATGGAGAGC GCCGGCATCA CCTTGGTCAA GGGCGATCTT
GGCGGCATCG TGCGCGCGCG CAAGCTGTCG CAGGCGACGA TGCGCAATAT CAGACAGAAC
TTGTTCTTTG CCTTCGTTTA CAATGGCGCC GGGATTCCGA TCGCGGCGGG GATTCTCTAT
CCGACATTCG GACTGTTGCT GTCGCCGATC ATCGCCGCCG CGGCGATGTC GCTGTCGTCG
GTCAGCGTGA TCGGAAATGC ATTGCGGCTG CGCGCCACGC GGCTGTAA
|
|---|
| Protein sequence | MTKTNDGANE QTRSCCGGMA KADRPNAASR PDLVQLTDLT QHPRATAAKA IDPVCGMSVD
TSAGKPQFDY QGTTYHFCCK GCRSKFATDP ESYLAKQRDA KTAAMSSCCG GTDDHVGHGH
AHHDHAQHAP AAALAIDPVC GMNVDTSAGK PQFDYHGTTY HFCCNGCRSK FAADPESYLD
KSKAKPQPAA PEGTIYTCPM DPQIRQVGPG SCPICGMALE PELVTLDAAP NAELIDMTRR
FWIGLLLSLP VVVLEMGGHL AGEHNWVDPT LSNWIQFALA SPVVLWAGWP FFVRGVQSLI
TRNLNMFTLV AMGTGVAYLY SLVGTLLPQA FPSAFRSHGG AVPVYFEAAA VITVLVLLGQ
VLELRARDAT SGAIRALLGL APRTARRIDD AGADHEVEID ALVVGDKVRV RPGEKVPVDG
VILEGRATLD ESLVTGESLP ATREIGDQVI AGTLSQSGGF VMRAEQVGRD TVLSRIVQMV
AQAQRSRAPI QRVADQVAGW FVPAVIAVAI TAFFAWSAFG PEPRLTYALV AAVSVLIIAC
PCALGLATPM SIMVGVGRGA QAGVLIRNAE ALERMEKVDT LVVDKTGTLT EGKPSVVAIV
AADGFDETTI LRLAASVERA SEHPLADAVL RAAKERQIEL SKVEEFDAPS GKGATGKVDG
KTVLLGNAVL LSSAGVDSRA LDDRAEQLRG DGATVINIAI DGRLAGLFAI ADPVKASTPD
ALKAMAAEGI KVIMLTGDNR TTAEAVARRL GIAEVEAEVL PAQKSAVVEK LRRAGRIVAM
AGDGVNDAPA LAAADVGIAM GTGTDVAMES AGITLVKGDL GGIVRARKLS QATMRNIRQN
LFFAFVYNGA GIPIAAGILY PTFGLLLSPI IAAAAMSLSS VSVIGNALRL RATRL
|
|---|
| |