Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3812 |
Symbol | |
ID | 3969271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4242590 |
End bp | 4244299 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637926922 |
Product | magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase |
Protein accession | YP_533665 |
Protein GI | 90425295 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | [TIGR02026] magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATGCT TTCTTGACAA TGACGGGAGA GAGTCAGTGC GCATTATTCT CATTCATCCG AATTACCATT CTGGCGGCGC CGAGATCGCA GGAAACTGGC CGCCGGCATG GGCGGCCTAT CTCGCCGGCG CACTGAAGTC GAATGGCTTC ACCGACCTTC GCTTCATCGA TGCGATGACC GAGAACATCT CCGACGAAGA CCTCGCGGCG ATTCTCGCCG AGGAGAAGCC GGACATGATC GGCTGCACCT CGATCACGCC ATCGATCTAC AAGGCCGAGC GTACGCTGCA GATCGCCAAA CAGGTGCATC CGGATTGCGT CACCGTGTTG GGCGGCGTGC ACGCCACCTT CATGTTCCAG CAGGTGCTGG GCGAAGCGCC CTGGATCGAC GTGGTGGTGC GCGGCGAAGG CGAAGAAATC CTCGTCGAGC TGGCGCGCGC GATCGAGAGC GGCCAATGGC CGGCCAACCG CAACGACATC AAGGGCATCG CCTTCCCCGA TCAGGCCGCC GACGGCACCC AGGTGGTCGC CACCGCGGCC GCGCCCACCA TCAAGGACCT CGACGGCATC AGCCCGGACT GGGGCATCCT GAAGTGGGAC ATGTACAAAT ACATCCCGAT GAACACCCGG GTCGCGATCC CGAACATGGC GCGCGGTTGC CCGTTCACCT GTTCGTTCTG TTCGCAGTGG AAGTTCTGGC GCGACTATCG GGTCCGCGAC CCGAAGAAGG TGGTCGACGA AATCGAGGAG TTGGTCAACA AGTACCAAGT CGGTTTCTTC ATCCTCGCCG ACGAAGAGCC CACCATCAAC CGCAAGAAGT TCATCCAGTT CTGCGAAGAG CTGATCGCCC GCGGCCTGAA CAAGAAGGTG CAGTGGGGCA TCAACACCCG CGTCACCGAC ATTCTGCGCG ACGAGAAGCT GCTGAAGTTC TACAACGAGG CGGGCTTGAT GCACGTCTCG CTCGGCACCG AGGCCGCGGC GCAGCTCAAG CTCGACCTGT TCAACAAAGA GACCAAGATC TCCGACAACA AGAAGGCGAT CCGTCTGCTG CGCGAAGCCG GCATCGTCTG CGAAGCCCAG TTCATCGTCG GCCTCGATAG CGAGACCCCG GAGACGCTGG AAGAAACCTA CCGCATGGCG ATGGACTGGA AGCCCGACCT CGCCAACTGG TCGATGTACA CGCCGTGGCC GTTCACGCCG CTGTTCAAGG AACTCAGCGA CAAGGTCGAG GTGTTCGACT TCGACAAGTA CAACTTCGTC ACCCCGATCC TGAAGCCGGC GGCGATGGAG CGCGGCGAAT TGCTCGACCG GGTGATGAAC AACTATCGCC GGTTCTACAT GTACAAGGCG TTCTTCTCCT ATCCGTGGTC GGGCACCGGG CGGCGTCGCC GCTATCTGCT GGGCTGCCTG AAGGCATTCC TGAAGGCCGG CTTCGAACGC AAGTTCTACG ATCTCGGCCG GGTCGGCTAT TGGGGCCCGC AGTCGAAGAA GAAGGTGGAC TTCCACTTCG ACAACACGCG CTCCAAGGCG TTCGGGCAGA CCGCGGATTG GGAAGCCAAC GCCGACCGTT CGCGCAAGGC GACCACGCCC ACCATCGTCT CCGCCTGCGG CGGCGGCACC GAGCAGATGG CGGAAGACGC CGAATGCGCG GCCCTGCAGG CCAAGGTATT GGACAAAGCC GATGGCGCCG GCGCAGTCAG CCGCCATTAA
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Protein sequence | MSCFLDNDGR ESVRIILIHP NYHSGGAEIA GNWPPAWAAY LAGALKSNGF TDLRFIDAMT ENISDEDLAA ILAEEKPDMI GCTSITPSIY KAERTLQIAK QVHPDCVTVL GGVHATFMFQ QVLGEAPWID VVVRGEGEEI LVELARAIES GQWPANRNDI KGIAFPDQAA DGTQVVATAA APTIKDLDGI SPDWGILKWD MYKYIPMNTR VAIPNMARGC PFTCSFCSQW KFWRDYRVRD PKKVVDEIEE LVNKYQVGFF ILADEEPTIN RKKFIQFCEE LIARGLNKKV QWGINTRVTD ILRDEKLLKF YNEAGLMHVS LGTEAAAQLK LDLFNKETKI SDNKKAIRLL REAGIVCEAQ FIVGLDSETP ETLEETYRMA MDWKPDLANW SMYTPWPFTP LFKELSDKVE VFDFDKYNFV TPILKPAAME RGELLDRVMN NYRRFYMYKA FFSYPWSGTG RRRRYLLGCL KAFLKAGFER KFYDLGRVGY WGPQSKKKVD FHFDNTRSKA FGQTADWEAN ADRSRKATTP TIVSACGGGT EQMAEDAECA ALQAKVLDKA DGAGAVSRH
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