Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3798 |
Symbol | |
ID | 3969218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4222647 |
End bp | 4225241 |
Gene Length | 2595 bp |
Protein Length | 864 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637926908 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_533651 |
Protein GI | 90425281 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCCACC GCGTTGACCC GGCCATGAAG CCGAGTTCCA AACGATTGCT CGGCGTGCTG TTCCTGACCA GCTTCAGCTT GATCGCCGCC ATCGTCGGCA CCAACCTGTT CGTGATGAAT AATCTGCGGG AAAGCACGCT GCGCACCGCG GAAATCAACC TCGCCCGCTA CAGTCTCACG CTCGCGGAAG AGGCGGACCG CTCGTTCAAA TCGCTGGATC TGGTGCTGTC GAGCGTCGGC GACTATCTCG GTCGTCGCGG CGTGACCGAC AGCGCCTCCT ATCAGCAAAC GATGTCCGAT CAGGAAACCC ACCTGATGCT GCGGGAAAAG ATCACCGGGC TGCCGCAGGT GGACGCCGTG ACCATGATCA ATGAACGCGG CAAGCTGATC AATTTCTCGC GCTACTGGCC GATTCCCGAC GTCGATATCT CCGATCGCGA TTATTTCCGC GCGCTGCAGG CCGACGCCAA TCTGGAAACC TTCATCAGCG CGCCGGTCCA AAACCGCGGC ACCGGCACCT GGAACATCTA CATTGCGCGC CGGCTGAACG ACCCCAACGG CGCCTTCATG GGGTTGCTGC TCGGCGCGAT GTCGCTGCAG TATTTCGAGA ATTTCTTCGG AGCCACATCG CCCGGTGTCG GCACCGCGGT GTCGCTGGTG CGCGACGACG GCCTATTGCT GGCGCGCTAT CCGGCATCCG ATCGGATCGG CAAGATTTCC TCAGGCGCCG GGCAGCGGGC GTTGGCGGCC GGCGGCAGCC TGCGCGAAGC CGGCGACACG GATCAGCAGA TGCGGCTGCA CGCGGCGCGC ATGCTGCCGA ACTATCCGGT GCTGATCGCG GTGAGCCAAA CCGAAGTCAG CGCCCTGCAG AGCTGGCGCA GTATCGCGGC CTTGATCGTG GCGATGTCGT CGCTCACCGC CATCGTGCTC TTGATCGTCA CCGTGGTGAT CGCCCGCTGG TGGATCAGAC AGGACCAATT GATCAGCGAC GCCCAGTCGG CGAACGCCGC GAAGTCCACC TTTGTGGCGA TGATGAGTCA CGAAATTCGC ACGCCGATGA ATGCGGTGCT CGGGCTCGCC ACCAACCTGC TCGACAGCCG GCTCGACGCC GAGCAGCGCC GCTCGGTGGT CGGCATCCAC GACGCCGGCG ACGCACTGCT CGACATTCTC AACGATATTC TGGATTTTTC CAAGCTGGAG GCCGGACGGC TGTCGCTGGA ATCCATCGCT TTTTCGCCCG AGGCGCTCGT TGAAAGCGCG CTCAGCATCG TGCTGCCCCG CGCCACCGCG CGCGGGCTGC GGGTCCGAAA CCAGATCGAT CCGTCGCTTC CGATCGCGCT GCAAGGCGAT GCCGGCCGGA TTCGCCAGGT GCTGCTGAAC CTGATGTCGA ACGCGGTGAA ATTCACGCCG TCCGGCGAGG TCGTGGTGAC GACGAAGTGC CGTTGGGCGG ACGAGAGCTT CGCCGCGCTG GAGTGGATCA TCGCCGACAC CGGGATCGGC ATCGCCGAAC AAGACATCGG CTCGCTGTTC ACCGATTTTG CCCAGGCCGA CAGCTCGATC AGCCGGCGGT TCGGCGGCTC GGGTCTTGGG CTGGCGATCT GCAAGCGCCT GGTCGAGCAG ATGGGCGGCG AGATCCAGGT GAGTTCGGCC TACGGCAAAG GCACCACCTT CAGGTTCAGC CTCACGCTTC CGCTCGCCAG TCAGTTGCCG GTGCCCGACA CCGACGACCC GGTGGTCTAC AGCGATTTCC GCCAGCGGAT CGCCGCGCTC GGCCGGCCGC TGCGGATTCT GATCGTCGAC GACAACCCGA CCAACCGACT GGTCGCGGCG AAGATGCTGC AGGACTTCCC GACCCAGACC AACACCGCCT CCGACGGCAA CGAAGCGGTG ACCGCCGCCA CCCGCTTCAG CTACGACGTG ATCCTGATGG ACGTCCGGAT GCCGGAGATG GACGGACTCG AGGCCACCCG GGCGATCCGG GCTTGCGATG GCTCAATGCA AGGCGCTCCG ATCATCGCGT TCACCGCCAA CGCCTTCGCG GAAGACGCGA TCGCCTGTCG CGAAGCCGGC ATGAACGACT TCGTTTCCAA GCCGGTGCGC AAGAAGGCGC TGATCGAAGC GATCCTGCGG GTGCTGCCAC GGCCCGATAC GGCCGGCGAA CGCGCCATCG CCGCCGCAAC CGACGGCATC GACCTTGCGC CCTCGCGACA GCCAAAGCCA GGCGTACCGG CCGCCACGAC GCTGCATGTG GCCCGCGACA CCTATGAGAC CATGGTCGAG GAAATCGGCT GCGAGGCGAC GCTGGAGATC ATCGCCGTCT TCGTCAAGGA TACCGACGAA CGGCTGGCGT TGTTGCGGCA GCTGTCGGTC GCGTCGCATC GCCGCGAGAT CGAACGCGAG GCGCATTCGC TGAAGAGTGC TGCTGCCACG TTCGGACTGC ATGACCTCGC CGGGCTGGCC CGGGAGTTGG AAAAGACCGC GCCCGTGATC ACCGAGGCCG ATTACATCGC GATGATCGGT CGCCTCGAAA CCGCCTTCGG CGCGGCACGC GCGGCGCAGC GCCCGGACGA CGGCTGTGTG ACGGTCTCGA TCTGA
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Protein sequence | MCHRVDPAMK PSSKRLLGVL FLTSFSLIAA IVGTNLFVMN NLRESTLRTA EINLARYSLT LAEEADRSFK SLDLVLSSVG DYLGRRGVTD SASYQQTMSD QETHLMLREK ITGLPQVDAV TMINERGKLI NFSRYWPIPD VDISDRDYFR ALQADANLET FISAPVQNRG TGTWNIYIAR RLNDPNGAFM GLLLGAMSLQ YFENFFGATS PGVGTAVSLV RDDGLLLARY PASDRIGKIS SGAGQRALAA GGSLREAGDT DQQMRLHAAR MLPNYPVLIA VSQTEVSALQ SWRSIAALIV AMSSLTAIVL LIVTVVIARW WIRQDQLISD AQSANAAKST FVAMMSHEIR TPMNAVLGLA TNLLDSRLDA EQRRSVVGIH DAGDALLDIL NDILDFSKLE AGRLSLESIA FSPEALVESA LSIVLPRATA RGLRVRNQID PSLPIALQGD AGRIRQVLLN LMSNAVKFTP SGEVVVTTKC RWADESFAAL EWIIADTGIG IAEQDIGSLF TDFAQADSSI SRRFGGSGLG LAICKRLVEQ MGGEIQVSSA YGKGTTFRFS LTLPLASQLP VPDTDDPVVY SDFRQRIAAL GRPLRILIVD DNPTNRLVAA KMLQDFPTQT NTASDGNEAV TAATRFSYDV ILMDVRMPEM DGLEATRAIR ACDGSMQGAP IIAFTANAFA EDAIACREAG MNDFVSKPVR KKALIEAILR VLPRPDTAGE RAIAAATDGI DLAPSRQPKP GVPAATTLHV ARDTYETMVE EIGCEATLEI IAVFVKDTDE RLALLRQLSV ASHRREIERE AHSLKSAAAT FGLHDLAGLA RELEKTAPVI TEADYIAMIG RLETAFGAAR AAQRPDDGCV TVSI
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