| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3795 |
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| Symbol | |
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| ID | 3969215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4219877 |
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| End bp | 4220659 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637926905 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_533648 |
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| Protein GI | 90425278 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCTTG GAATCAAAGG CCGCCGTGCG CTGGTGTGCG CATCCAGCAA GGGATTGGGG
CGCGCCTGCG CCACCGCGTT GGCCGCGGAA GGCGTGCACG TCACCATGAC GGCACGCGGT
GCCGAAGCGC TGGCGCAGGC CGCCGCGGCG TTGCGCCAGG CCTATCCCGG GGTCGAGATC
ACCGAAGTCG TCGGCGACAT CACCACGCCG GAAGGCCGCG CTGCCGCGCT GAAGGCCTGC
CCCTCGCCCG ACATCCTGGT CAACAATGCC GGCGGCCCGC CGCCCGGCGA TTTCCGCACC
TGGACCCGCG ACGATTGGAT CAAGGCGCTC GACGCCAACA TGCTGACCCC GATCGAACTG
ATCAAGGCCA CGGTGGACGG CATGATCGAA CGCAAGTACG GCCGCATCGT CAACATCACC
TCGGCCGCCG TGAAGGCGCC GATCGACGTG CTCGGACTGT CCAACGGCGC ACGAAGCGGC
CTCACCGGCT TCGTCGCCGG GCTGTCGCGC AAAACCGTGC GCCATAACGT CACCATCAAC
GCGCTGTTGC CGGGGCCGTT CGACACCGAC CGGCTGCGCA CGGTCTCGGC CGGTCAGTCC
AAGGCCAGCG GCATTCCGGT CGAGGAGATC ATGAGCAAGC GGATGAGCGA GAACCCGGCC
GGGCGGTTTG GCGATCCGGA AGAGTTCGGG CTCGCCTGCG CGTTTTTGTG CGGTTCGAAA
GCCGGTTTCA TCACCGGGCA GAACATCCTG CTCGACGGCG GCGCGTTTCC CGGAACGTTC
TGA
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| Protein sequence | MDLGIKGRRA LVCASSKGLG RACATALAAE GVHVTMTARG AEALAQAAAA LRQAYPGVEI
TEVVGDITTP EGRAAALKAC PSPDILVNNA GGPPPGDFRT WTRDDWIKAL DANMLTPIEL
IKATVDGMIE RKYGRIVNIT SAAVKAPIDV LGLSNGARSG LTGFVAGLSR KTVRHNVTIN
ALLPGPFDTD RLRTVSAGQS KASGIPVEEI MSKRMSENPA GRFGDPEEFG LACAFLCGSK
AGFITGQNIL LDGGAFPGTF
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