| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3792 |
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| Symbol | |
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| ID | 3969480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4216497 |
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| End bp | 4218104 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637926902 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_533645 |
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| Protein GI | 90425275 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA GCTATGATTT CATCGTGGTC GGCGGCGGCT CCGGCGGCTG CGCGGTGGCC
GGCCGGCTGT CGGAAGATCC TGCCACTTCG GTGGCGCTGC TCGAGGCCGG CGGCGCCTGC
GACAATTGGG TGGTGAAGAC GCCCTACACG CTAGCCTTCA TGGTGCCGAG CAAGCTCAAC
AACTGGCATT TCCACACCGT GCCGCAGCGC GGCCTGGGCG GCCGGATCGG CTATCAGCCG
CGCGGCAAGG GGCTCGGCGG CTCCTCGGCG ATCAACGCTA TGGTCTATAT CCGCGGCCAC
AAATCGGACT ACGACCATTG GGCCGCGCTC GGCAACGCCG GCTGGTCCTA TGACGACGTG
CTGCCGTATT TCAAGCGCTC GGAAAACAAC TCCGATTTCA ATGGCGCGTA TCACGGCCAA
AGCGGTCCGC TGCATGTCAA CAAGCTGCGC ACCGACAATC CGGTCCACGA GATCTATCTG
CAAGCGGCGC GCGAGGCCCA GTTCCGGATC CGCGACGACT TCAACGCCGA GGAGCAGGAA
GGCCTCGGCC TCTATCAGCT GACCCAGCAC AATGGCGAAC GCTGGAGTGC GGCGCGCGCC
TATCTGCAGC CGCATATCGG CCAGCGCGCC AATCTGCGGG TGGAGACGCA GGCCCATGCC
AGCCGCATCC TGTTCGACGG CACCCGCGCG GTCGGCGTCG AATATCGCCA GGGCAACCAA
ACGCTGCAGC TGCGCGCGCG GCGCGAGGTG ATCCTGTCGT CGGGCGCGTT CCAGACGCCA
CATTTGTTGA TGCTGTCCGG TGTCGGCGAC GCGGAGGCGC TGGCGCAGCA CGGCATTGCG
TCGGTGCATC ATTTGCCCGG CGTCGGCCGG AATTTGCAGG ACCATCCGGA CTTCATCTTC
GCCTACATGT CGGACAGTCC GTATTTCACC GGCACCTCGT TCCGCGGCAT CGCGCGGCAA
CTGGCCTCGA TCGGCAAGTA TCGACGCGAA GGCCGCGGCG CGATGACCAC CAATTTCGCC
GAATGCGGCG GCTTCCTGAA GACCCGCCCC GAGCTCGACG CGCCAGATAT CCAACTGCAT
TTCGGCATGG CGATCGTCGA CGACCACGGC CGCAAGCGGC GCTGGGGCAC CGGCTTTTCC
TGCCACGTCT GCCTGCTGCG GCCGGACAGC CGCGGCAGCG TCGGCCTAAA CAGCGCCGAT
CCGCTGGCGC CGCCCTCGAT CGATCCGAAC TTTCTCGGCG AGGATAGCGA CCTCGACGCC
ATGGTGGCGG GCTACAAGAC CACCCGCCGG CTGATGGAGA CGCCGGCGCT GAAGGCGCTG
CAGCAGAGGG ACATGTTCAC CGCGCAGGTG CGCAGCGACG ACGACATTCG CAACATTCTG
CGCGCGCGCG TCGATACCGT GTACCACCCG GTCGGCACCT GCAAGATGGG GGTCGACGAC
GCGATGGCGG TGGTCGATCC GCAACTCAAG GTCCACGGCC TGCAGGGGCT GCGCGTCGTC
GACGCCTCGG TGATGCCGAC GCTGATCGGC GGCAATACCA ACGCCCCGAC CATCATGATC
GGCGAAAAGG CGGCGGACAT GATCCGCGGG GAGTTGCGGG TGAACTAA
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| Protein sequence | MSESYDFIVV GGGSGGCAVA GRLSEDPATS VALLEAGGAC DNWVVKTPYT LAFMVPSKLN
NWHFHTVPQR GLGGRIGYQP RGKGLGGSSA INAMVYIRGH KSDYDHWAAL GNAGWSYDDV
LPYFKRSENN SDFNGAYHGQ SGPLHVNKLR TDNPVHEIYL QAAREAQFRI RDDFNAEEQE
GLGLYQLTQH NGERWSAARA YLQPHIGQRA NLRVETQAHA SRILFDGTRA VGVEYRQGNQ
TLQLRARREV ILSSGAFQTP HLLMLSGVGD AEALAQHGIA SVHHLPGVGR NLQDHPDFIF
AYMSDSPYFT GTSFRGIARQ LASIGKYRRE GRGAMTTNFA ECGGFLKTRP ELDAPDIQLH
FGMAIVDDHG RKRRWGTGFS CHVCLLRPDS RGSVGLNSAD PLAPPSIDPN FLGEDSDLDA
MVAGYKTTRR LMETPALKAL QQRDMFTAQV RSDDDIRNIL RARVDTVYHP VGTCKMGVDD
AMAVVDPQLK VHGLQGLRVV DASVMPTLIG GNTNAPTIMI GEKAADMIRG ELRVN
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