Gene RPC_3782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3782 
Symbol 
ID3969469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4207624 
End bp4208757 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content63% 
IMG OID637926891 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_533635 
Protein GI90425265 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCG ATACGATCAG GGCGCTGCTG GTCGACGATG CCGAGATTGA ATACCGGTCG 
CTCGACCGCA TGCTGCAGAA GATCTCCACC CGGCGTTATC GGCTGGATTG GGCCGCCAGC
TTCGACGAGG GACTCGCCGC CTTCCGACGC GACGAACACG ACGTCTTTTT GGTGGACTTC
CGGCTCGGTC CCGAGAGCGG TCTCGATCTG ATCCGCCGCG CGCGCGAATT CGGCGTGATG
AAACCGATCA TCATGCTCAC CGCCTACGGC GATGCCATCA TCGATGCCGC CGCCACCAAG
ATCGGCGCGA ACGACTATCT GGTGAAGGGC GAATACGACG CCGTGCTGCT CGACCGCGCG
ATCCGCTATT CGACCCGCAA CGCGCAGAAC CTGGTCGACC TCAACCGCAG CCTCGCCGAG
ACCGGCGCGG TGATTCGCGA GTTGAAGTCC GAGACCGAGC GCCGCATGGT CGCCGAGGCC
GAAGTCTCGA ATGTACTGCG TCGGACGGTG GCCGAGCAAG AAGCCGAACG GCGACGCATC
ACCCGAGAGC TGCACGACAA TATCGGCCAG TCGGTGACGC TGTTGCTGCT CGGATTGGGA
TCGCTGGCGC GCTGCACGGT CCCGGGCTGC GAGGCCGCCG AGAAGGTCGA CGGATTGAAA
GACATCGCGC GGCGCATGAG CATGGATCTG CACCGCCTCG CCTGGGAGAT CCGGCCGGCG
ATGCTCGACG ATCTCGGACT TGAGACCGCG ATTCGGCAAC TCACCGTCGA ATGGTCGCAA
CATTGCGACC TCAGCTTCGA CCTGTTCCTG TCGCTGGGCG ACCGCCGCTT GCCGCACAAT
GTGGAGAGCG CGCTGTATCG TGTGGTGCAG GAGGGAATCA ACAATGTGGT CCGCCACGCC
CATGCCAGCA GGGTCGGCAT CATCCTGAAG GCCTGGGACA ATGTCGTCAG TTGCATCATC
GAAGATGACG GCGGCGGCAT CGCCGATCGT CCGGCGGGAC CGACGTCGGA TACCGCGTTC
TCGGGGCTCG GACTGATCGG CATGAGAGAG CGACTGGCCT TGGTCAATGG CACGCTGGAT
TTCGAATCGA GTCCGGGCAA AGGCACCACG CTGTTCGCGC GCGTGACGTT ATGA
 
Protein sequence
MSSDTIRALL VDDAEIEYRS LDRMLQKIST RRYRLDWAAS FDEGLAAFRR DEHDVFLVDF 
RLGPESGLDL IRRAREFGVM KPIIMLTAYG DAIIDAAATK IGANDYLVKG EYDAVLLDRA
IRYSTRNAQN LVDLNRSLAE TGAVIRELKS ETERRMVAEA EVSNVLRRTV AEQEAERRRI
TRELHDNIGQ SVTLLLLGLG SLARCTVPGC EAAEKVDGLK DIARRMSMDL HRLAWEIRPA
MLDDLGLETA IRQLTVEWSQ HCDLSFDLFL SLGDRRLPHN VESALYRVVQ EGINNVVRHA
HASRVGIILK AWDNVVSCII EDDGGGIADR PAGPTSDTAF SGLGLIGMRE RLALVNGTLD
FESSPGKGTT LFARVTL