| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3781 |
|---|
| Symbol | |
|---|
| ID | 3969468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 4207163 |
|---|
| End bp | 4207627 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637926890 |
|---|
| Product | response regulator receiver domain-containing protein |
|---|
| Protein accession | YP_533634 |
|---|
| Protein GI | 90425264 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.699777 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACGCG ACAATGCAGT GCCGACCGTA CTGGTCGCGG AAGATCACAA CTACGACCAG
ATGATTCTGA AAGAGGTGTT CTCGCGCGCC GGGATCCGCG CCGACCTGCG CTTCGTCAAC
GACGGCGAGC AGATGCTCGA TTATCTGCAC CGCCGCGGGC GGTTCGCCGA GGCGTTGTCC
GCCCCCACCC CCGCGCTGAT TCTGCTCGAT CTCAACATGC CGCGGCTGGA CGGCCGCAAG
GTGATCCGCA TGCTGCGCGA GGACGACACC ATCCGGCACC TGCCGGTGAT CGCGCTGTCC
ACCTCCGAGA GCATCAAGCA CATCACCGAG GCCTATTCGA TCGGCATCAA CGCCTACCTG
GTCAAGCCCG CCAACATTCC CGACTACGTC ACCAAGATCA ATTCGCTGTG GCAATTCTGG
ATGGTGGCGG CTTCGCTGCC GGTGGTGGAG ACCTCACCCT CATGA
|
|---|
| Protein sequence | MTRDNAVPTV LVAEDHNYDQ MILKEVFSRA GIRADLRFVN DGEQMLDYLH RRGRFAEALS
APTPALILLD LNMPRLDGRK VIRMLREDDT IRHLPVIALS TSESIKHITE AYSIGINAYL
VKPANIPDYV TKINSLWQFW MVAASLPVVE TSPS
|
|---|
| |