| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3780 |
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| Symbol | |
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| ID | 3969467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4204821 |
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| End bp | 4207160 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637926889 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_533633 |
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| Protein GI | 90425263 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.689927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.970382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTC CGCACGACCC GCCGACGCCC GACAATCTGC TCGATGCCTA TGGCGATCGC
TCGGCCCTCG AGCTGACCGA ATGCGACCGC GAACCGATCC ACATTCCCGG CAAGATTCAA
CCGCACGGCA TGCTGTTGGC GTTCGTCGAG CCCGAGCTGC GCCCGGTCTC GGTCAGCGTC
AACGTCGAGG CTTTCACCGG CCAATCCCCC GAGGCGGTGC TGTCGCAATC GATCGCGGCG
TTGATGACCG CGCCGAGTTT CGAACGTTTG ACCGCGGTTC TCGCCAGCCC GGACCTCGCC
GCCTTCAATC CGATCCGGAT CGAACTGCTG ACCAGCAAGG GGGTGCGGGT CTGCAACGGC
ATCATGCACC GTCACGACGG CTTGACGATT CTGGAACTGG AGCCACGGCC CGCCGGCGCC
GAGCCGCCTG CGGAATTCTT CCGCAGCGTT CGCGCCGCGA TCCGCCGCCT GCAAACCGCC
AGCGATCTGC TGACGGTGTG CAATATCGCG GCCCGCGAGG TGCGTCGCCT GACCGGCTTC
GACCGCGTCA AGATCTACCG TTTCGACAAG GACTGGAACG GCCAGGTCGT TGCCGAGGAT
CGCTCCGACA GCATTCCGTC GTTTCTCGAC TTCCACTTTC CGGCGTCCGA CATCCCCGCG
CAGTCGCGCG CGCTCTACAC CAGCAATCTG ATCCGCATCA TCCCGGATAT CGGTTACCGC
CCGGCACCGC TGATCCCGGA TTTCAATCCG GTCACCGGCG GGCCGATCGA CCTCAGCTTC
GCCGTGCTGC GCAGCGTATC GCCGATCCAC GTCGAATACA TGGTCAACAT GGCGGTCTAC
GGCGCGATGT CGGTGTCGAT CGTGCGCGAC GGCCGGTTGT GGGGGATGAT CTCCTGCCAC
AACACGCTGC CGCGCTTCGT GTCCTACGAA GTCCGCCAAG CCTGCGAACT GATCGCCCAG
GTGCTGACCT GGCAGATCAG CGTGTCCGAA GAGGCCGAGG TCGTTGGCCA CAGCGTCCGG
GTGCGCGCCA TGCAGAACCG AATGCTGCAC GAACTCGGCG ACGAACAGGA CCTCAAGAAA
TGGCTGATCC GCAGCGGACA GGACATGCTC GACCTGATGC GCGCCTCCGG CTTCGCGCTG
TGCGGGTTCG ACGGCATCAC CACATTCGGA TCGTCGCCGT CGAACGACCA GGTCCTTGAG
CTTGCGGCCT GGCTGGCGCG CCGCGAATCG CGCGACGTCT ATGAGACCGA GCATCTCTCC
GCCAAAAACC CCAACGCCAC GCACTATCCG CACCTCGCCA GCGGCGTTCT CGCCGTGCCG
CTCGGACGGG TGTCCTCGAC TTTGATGCTC TGGTTCCGGC CGGAGCAGGC GCAGACCGTG
ACCTGGGGCG GAGATCCTCA CAAGCCGGTG CGGATCGGCC CGCATGGCGG CCGGCTGCAG
ACCCGGGCTT CGTTCGATGC CTGGCGCGAA GAGGTACGCG GGCGCTCCAA GCCCTGGCAG
ACCTACGAAA TCGCCGCCGC GGTCGAAATC CGCGATCTCG TGGTCGACGT CATCCTCGGC
CGGGCCGACG CGCTCGAACA CGCCAACCGC GAGCTGTCGC GCAGCAACGA CGAGTTGGAG
TCGTTCGCTT ACGTCGCGGC GCACGATCTC AAGGAGCCGT TGCGCCATAT CGAGGCCTTC
GCCGGCCTGC TCAAGGACGC GCTTTCGGTC GACGCCAAGG CGCGGTTGAG CACCATGGTC
GACGGCATCG AGGCCTCGTC GCGGCGGCTG CGGGCGTTGA TCAACGACCT CGCGGAATAT
TCCCGCGTCG GCCGCGACGC GCGCCCGCTC GTTCCGGTGG CGTTGGACGA CGTGCTCGCC
GAAGTGCTGG CTGACCTCAA GCCGGTGTTG CATGACAGCG GCGCCATCTT GTCCTCCGAC
TCGCTACCGG TGGTGATGTG CGACCGCAGC CAGATCAGAC AATTGCTGCA GAACCTGATC
TCCAATGCGC TGAAATACAG CGACGCGTCC CGCCCGCCGC GGATCACCCT GCGCGCCACC
GAACAGCCCG GCCCGGCCAG CGGCTTCGGC TCGGCCGGCG GCGAACGCCA ACGCCACGTC
GCGATCGCGG TCGGCGACAA CGGCATCGGC TTCGATCCTA AATATGCCGA GCAGATCTTC
GAGCCGTTCC AGCGCCTGCA CGGCGCCGAC GAATATGAAG GCACCGGCAT CGGCCTGGCG
ATCTGTCGCA AGCTCGCGCA ACGCCATGGC GGAAAGATCA CCGCCCGCAG CGAGCCCGGC
GTCGGCTCCA CCTTCACCTT CACGCTGCCG CTGCGCAACC TCGACGAGTT GGAACAGTAG
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| Protein sequence | MSAPHDPPTP DNLLDAYGDR SALELTECDR EPIHIPGKIQ PHGMLLAFVE PELRPVSVSV
NVEAFTGQSP EAVLSQSIAA LMTAPSFERL TAVLASPDLA AFNPIRIELL TSKGVRVCNG
IMHRHDGLTI LELEPRPAGA EPPAEFFRSV RAAIRRLQTA SDLLTVCNIA AREVRRLTGF
DRVKIYRFDK DWNGQVVAED RSDSIPSFLD FHFPASDIPA QSRALYTSNL IRIIPDIGYR
PAPLIPDFNP VTGGPIDLSF AVLRSVSPIH VEYMVNMAVY GAMSVSIVRD GRLWGMISCH
NTLPRFVSYE VRQACELIAQ VLTWQISVSE EAEVVGHSVR VRAMQNRMLH ELGDEQDLKK
WLIRSGQDML DLMRASGFAL CGFDGITTFG SSPSNDQVLE LAAWLARRES RDVYETEHLS
AKNPNATHYP HLASGVLAVP LGRVSSTLML WFRPEQAQTV TWGGDPHKPV RIGPHGGRLQ
TRASFDAWRE EVRGRSKPWQ TYEIAAAVEI RDLVVDVILG RADALEHANR ELSRSNDELE
SFAYVAAHDL KEPLRHIEAF AGLLKDALSV DAKARLSTMV DGIEASSRRL RALINDLAEY
SRVGRDARPL VPVALDDVLA EVLADLKPVL HDSGAILSSD SLPVVMCDRS QIRQLLQNLI
SNALKYSDAS RPPRITLRAT EQPGPASGFG SAGGERQRHV AIAVGDNGIG FDPKYAEQIF
EPFQRLHGAD EYEGTGIGLA ICRKLAQRHG GKITARSEPG VGSTFTFTLP LRNLDELEQ
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