| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3772 |
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| Symbol | |
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| ID | 3969365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4192927 |
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| End bp | 4194051 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926882 |
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| Product | hydrogenase (NiFe) small subunit (hydA) |
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| Protein accession | YP_533626 |
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| Protein GI | 90425256 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.427783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCAG GGACAGAAAC ATTCTATGAG GTGATCCGCC GCCAAGGCAT CACCCGGCGC
AGCTTCGTCA AATTCTGCAG CCTGACCGCG ACCAGCCTCG GGCTCGGCCC GATCGGCGCC
ACCGAGATCG CGCAGGCGCT GGAGACCAAG CCGCGGGTGC CGGTGATCTG GATGCACGGG
CTGGAATGCA CCTGCTGCTC GGAAAGCTTC ATCCGCTCGG CGCATCCTTT GGTCAAAGAC
GCCGTGCTGT CGATGATCTC GCTGGATTAC GACGACACCA TCATGGCGGC GGCCGGCCAT
CAGGCCGAAG CGATCCTGCA GGAGACCCGC GAGAAATACA AAGGCCAGTA CATCCTCGCG
GTGGAAGGCA ATCCGCCGCT CAACGAAGAC GGCATGTTCT GCATCGACGG CGGCCGCCCG
TTCGTCGAGA AGCTGAAGGA GATGGCCGAA GATTCCATGG CGGTGATCGC CTGGGGCGCC
TGCGCCTCCT GGGGCTGCGT GCAGGCGGCG AAGCCCAATC CGACCCAGGC CACCCCGATC
GACAAGGTGA TCCGCAACAA GCCGATCATC AAGGTGCCGG GCTGTCCGCC GATCGCCGAG
GTGATGACCG GCGTCGTCAC CTACATCACC ACTTTCGGCC GGCTGCCCGA GCTCGACCGC
CAGGGCCGGC CGAAAATGTT CTACTCGCAG CGCATCCACG ACAAATGCTA TCGCCGGCCG
CATTTCGACG CCGGCCAGTT CGTCGAAGAG TGGGACGACG ACGCCGCGCG AAAAGGCTAC
TGCCTGTACA AGATGGGCTG CAAGGGCCCG ACCACCTACA GCGCCTGTTC GACGGTGCGC
TGGAACGGCG GCGTCTCGTT CCCGATCCAA TCCGGCCACG GCTGCATCGG CTGCACCGAA
GATAATTTCT GGGACAACGG CTCGTTCTAC GACCGGCTGA CCACCATCAA GCAGTTCGGC
GTCGAGGCCA ACGCCGACAA GATCGGCGCC ACCGTAGCCG GCGTGGTCGG CACCGCGATC
GCCGCGCACG CCGCGGTCAC CACGGTGCGC AGCATGGCGA AACGTCGCAA GGAGAACGGC
GGCAACGGCA ACGGCAATAA ACCCAACGAC ACATCGGCCG GCTGA
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| Protein sequence | MGAGTETFYE VIRRQGITRR SFVKFCSLTA TSLGLGPIGA TEIAQALETK PRVPVIWMHG
LECTCCSESF IRSAHPLVKD AVLSMISLDY DDTIMAAAGH QAEAILQETR EKYKGQYILA
VEGNPPLNED GMFCIDGGRP FVEKLKEMAE DSMAVIAWGA CASWGCVQAA KPNPTQATPI
DKVIRNKPII KVPGCPPIAE VMTGVVTYIT TFGRLPELDR QGRPKMFYSQ RIHDKCYRRP
HFDAGQFVEE WDDDAARKGY CLYKMGCKGP TTYSACSTVR WNGGVSFPIQ SGHGCIGCTE
DNFWDNGSFY DRLTTIKQFG VEANADKIGA TVAGVVGTAI AAHAAVTTVR SMAKRRKENG
GNGNGNKPND TSAG
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