| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3771 |
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| Symbol | |
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| ID | 3969364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4191116 |
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| End bp | 4192909 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637926881 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_533625 |
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| Protein GI | 90425255 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.292608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.910106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACA TCACCACGCC GAATGGCTTC AAACTCGACA ATGCCGGCCG CCGCGTCGTC
GTCGATCCGG TGACCCGGAT CGAGGGACAT TTGCGCGTCG AGGTCAATGT CGACGCCAAC
AACGTGATCC GCAACGCGGT GTCGACCGGC ACGATGTGGC GCGGCATCGA AGTGATTTTG
CGCGGCCGCG ATCCGCGCGA CGCCTGGGCC TTCACCGAAC GGATCTGCGG CGTCTGCACC
GGCACCCACG CCTTGACCTC GGTGCGCGCG GTGGAAAACG CGCTCGACAT CAAGATCCCG
GAAAACGCCA ACACCATCCG CAACATCATG CAGCTGACGC TGCAGGTGCA CGACCACATC
GTGCATTTCT ATCATCTGCA CGCGCTGGAC TGGGTCGACA TCGTCTCGGC ACTGTCCGCC
GATCCGAAGG CGACCTCGAC GCTGGCGCAG AGCATTTCGA ACTGGCCGCT GTCGAGTCCG
GGCTACTTCA AGGATCTGCA GACCCGGCTG AAGAAGTTCG TCGAGTCGGG GCAGCTCGGG
CCGTTCAAGA ACGGCTATTG GGGCCATCCG GCCTACAAGT TGCCGCCGGA AGCCAATCTG
ATGGCGGTGG CGCATTATCT GGAGGCGCTC GACTTCCAGA AGGACATGGT GAAGATCCAC
ACCGTCTATG GCGGCAAGAA CCCGCATCCG AACTGGCTGG TCGGCGGCGT GCCCTGCGCG
ATCAATGTCG ACGGCGTGGG CGCGGTCGGT GCCGTCAACA TGGAGCGGCT CAACCTGGTG
TCGTCGATCA TCGACCAGAT GGTGACCTTC ACCGAGCAGG TCTATCTGCC GGACTTGCAG
GCGATCGCCT CGTTCTACAA GGATTGGACC TTCGGCGGCG GGCTGTCGTC GACATCGGTG
ATGAGCTACG GCGACATTCC GGAATACGCC AACGACTATT CGGCGGCGTC GCTGAAAATG
CCGCGCGGCG TGATCCTCAA CGGCAATCTC AACGAGGTGC TACCGGTCGA TCTCGCCGAC
CCCTCGCAGG TGCAGGAGTT CGTCACCCAC TCTTGGTACA AATATCCCGA CGAGACCAAG
GGCCTGCATC CGTGGGACGG TGTCACCGTT CCGCATTATG AGCTGGGGCC GAAGTCGAAG
GGCACCAAGA CCCGGATCGA GGCGGTCGAC GAGGAGGCGA AGTATTCCTG GATCAAGTCG
CCGCGCTGGA AAGGCAACGC GGTCGAGGTC GGGCCGTTGG CGCGCTACAT CGTCGGCTAC
GCGCAGAACA AGCCGGAGTT CAAGGAGCCG ACCGAAAAGC TCCTCAAGGA CCTCGGCCTG
CCGGTGACCG CGCTGTTCTC CACGCTCGGC CGCACCGCGG CGCGCGCGCT GGAGGCGCAA
TGGGCGGCGC ATCAGCTGCG CTACTTCCAG AACAAGCTGA TGGCGTCGCT GAAGGCCGGC
GACAGCGCCA CCGCCAATGT CGAGAAGTGG AGCCCGGAGA CCTGGCCGAA GGAGGTCAAG
GGCGTCGGCT TCACCGAGGC GCCGCGCGGC GCGCTCGGCC ACTGGATCAA GATCAAGGAT
GGCAAGATCG ACAACTACCA GGCGGTGGTG CCGACCACCT GGAACGGCAG TCCGCGCGAT
CCCAAGGGCG GCATCGGCGC CTTCGAGGCG AGCTTGCTCG AAACCCCGAT GGCCGATCCG
AACCAGCCTT TGGAGATCCT GCGCACGCTG CATTCGTTCG ACCCGTGTCT GGCCTGCTCA
ACTCATGTCT TGAGCGAGGA CGGCCAGGAA ATGAGCCGGG TGACGGTGCG CTGA
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| Protein sequence | MTNITTPNGF KLDNAGRRVV VDPVTRIEGH LRVEVNVDAN NVIRNAVSTG TMWRGIEVIL
RGRDPRDAWA FTERICGVCT GTHALTSVRA VENALDIKIP ENANTIRNIM QLTLQVHDHI
VHFYHLHALD WVDIVSALSA DPKATSTLAQ SISNWPLSSP GYFKDLQTRL KKFVESGQLG
PFKNGYWGHP AYKLPPEANL MAVAHYLEAL DFQKDMVKIH TVYGGKNPHP NWLVGGVPCA
INVDGVGAVG AVNMERLNLV SSIIDQMVTF TEQVYLPDLQ AIASFYKDWT FGGGLSSTSV
MSYGDIPEYA NDYSAASLKM PRGVILNGNL NEVLPVDLAD PSQVQEFVTH SWYKYPDETK
GLHPWDGVTV PHYELGPKSK GTKTRIEAVD EEAKYSWIKS PRWKGNAVEV GPLARYIVGY
AQNKPEFKEP TEKLLKDLGL PVTALFSTLG RTAARALEAQ WAAHQLRYFQ NKLMASLKAG
DSATANVEKW SPETWPKEVK GVGFTEAPRG ALGHWIKIKD GKIDNYQAVV PTTWNGSPRD
PKGGIGAFEA SLLETPMADP NQPLEILRTL HSFDPCLACS THVLSEDGQE MSRVTVR
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