| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3764 |
|---|
| Symbol | |
|---|
| ID | 3969357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 4186974 |
|---|
| End bp | 4187513 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637926874 |
|---|
| Product | putative hydrogenase expression/formation protein HupJ |
|---|
| Protein accession | YP_533618 |
|---|
| Protein GI | 90425248 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACTG ACGTCGATCG CGAGCAGGCT GAGGCTGCGA AGGCTGCGGC GATCGGCGCG
GCGCTGGCGG CGTTGTATCG CGCCGCCGAT CGCGGTATGC GCGAGCTGCC GATCCACAAC
GCCAAGCTCG ACGTCGCCGC GGTCGGCTTC CGCGCCCACG AGGGCCGCGC GCTCGGCGTG
GTGTTGACGC CGTGGTTCAT GAATCTGGTG CTGGCGCCGC TCGACGCGAC GGCGCCCAGC
GATGCCCCGC CCGGCGCGAC GCTGTCGCGC AGCCTGCCGG CGGGGACGTT CGATTTCACC
GTCGGCGCGT TGGATGGTTT TGGCATCATC GAGAGTTGCT CGCTGTTCTC GCCGATGTTC
GAGTTCGCCG ATCAGGACAG CGCGCTGGCC GCGGCCGAGG CGGCGCTCAA AGCGGTGCTC
GATCCGGAGT TCGACGTCGC GCCCGCCGCG ACCGAAGCTG CGCCGCCGCC ACCGCCCCCT
GCCGCGATCG ACCGCCGCAA TTTTTTGCGC GGCGCGTTGT CCAGCGGGGC GCGGCCATGA
|
|---|
| Protein sequence | MPTDVDREQA EAAKAAAIGA ALAALYRAAD RGMRELPIHN AKLDVAAVGF RAHEGRALGV
VLTPWFMNLV LAPLDATAPS DAPPGATLSR SLPAGTFDFT VGALDGFGII ESCSLFSPMF
EFADQDSALA AAEAALKAVL DPEFDVAPAA TEAAPPPPPP AAIDRRNFLR GALSSGARP
|
|---|
| |