| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3759 |
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| Symbol | |
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| ID | 3969352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4183229 |
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| End bp | 4184359 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637926869 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_533613 |
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| Protein GI | 90425243 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATATG TCGACGAGTA TCGCGACGGC CAACTCGCCC GAGGCCTCGC CGCCACCATC
GCCCGCGACA GCGATCCCGC GCGCAACTAC GCGCTGATGG AATTCTGCGG CGGCCACACC
CACGCGATCT CGCGCTACGG CCTCGAGGAT CTGTTGCCGG GCAACGTTCG CATGGTGCAC
GGTCCCGGCT GCCCGGTCTG CGTGCTGCCG ATCGGCCGCA TCGACATGGC GCTGCAGCTC
GCGACCCGGC CGAACGTGAC GCTGTGTTGT TACGGCGACC TGATGCGGGT GCCGGGCTCG
CGTGGCAACT CGCTGCTGCG CGCCAAGGCG GCGGGCGCCG ACATCCGCAT GGTGTATTCG
ACGCTCGATG CGCTCGCGCT CGCCGAGGCC GAGCCGTCGC GCGACGTGGT GTTCTTCGCC
ATCGGTTTCG AGACCACCAC GCCGCCGACC GCGCTGGCGG TCCGGCTGGC GCAGAAGCGG
GGCCTCACCA ATTTCAGCGT GTTCTGCAAC CACGTGCTGA CGCCGTCGGC GATCCAGCGG
ATTCTCGCTT GCGACAGCGA CGGTGTGCAC ATCGATGGCC TGGTCGGTCC GGCGCATGTC
TCCACCGTGA TCGGCACCGC GCCGTTCTCA CGCTTCGCAA CCGAGTTCGC CAAGCCGGTG
GTGGTGGCGG GCTTCGAGCC GCTCGACGTG ATGCAGGCGA TATTGATGCT GATCCGCCAG
GTCAATGACG GCCGCGCCGA GGTGGAAAAC CAGTACATCC GCGCGGTGAC GCCCGACGGC
AACCGGATCG CGCAGGGCGA AGTCGCGGAT ATCTTCGAAT TGCGTGAGAG TTTCGAGTGG
CGCGGGCTCG GCCAGATCCC CGCCAGCGCG CTGCGCTTGA AACCAGCCTA TGCCGGCTTC
GACGCCGAGC GGCGCTTTGC GCTCGACGAT ATGTCCGCCA GTGACAACCC GGCCTGCGAA
TGCGGCGCCA TCCTGCGCGG CGTCAAGCGC CCCGCCGAAT GCCGATTGTT CGGCAAAGCA
TGCACGCCGG AGAGTCCAAT GGGCTCCTGC ATGGTGTCGT CGGAAGGCGC CTGCGCGGCG
CATTGGAGCT ATGGCCGGTT TCGCGACCAC GCCCGGAGGA AAACCGCATG A
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| Protein sequence | MKYVDEYRDG QLARGLAATI ARDSDPARNY ALMEFCGGHT HAISRYGLED LLPGNVRMVH
GPGCPVCVLP IGRIDMALQL ATRPNVTLCC YGDLMRVPGS RGNSLLRAKA AGADIRMVYS
TLDALALAEA EPSRDVVFFA IGFETTTPPT ALAVRLAQKR GLTNFSVFCN HVLTPSAIQR
ILACDSDGVH IDGLVGPAHV STVIGTAPFS RFATEFAKPV VVAGFEPLDV MQAILMLIRQ
VNDGRAEVEN QYIRAVTPDG NRIAQGEVAD IFELRESFEW RGLGQIPASA LRLKPAYAGF
DAERRFALDD MSASDNPACE CGAILRGVKR PAECRLFGKA CTPESPMGSC MVSSEGACAA
HWSYGRFRDH ARRKTA
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