| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3748 |
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| Symbol | |
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| ID | 3970344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4173573 |
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| End bp | 4174628 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637926858 |
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| Product | nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_533602 |
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| Protein GI | 90425232 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0615825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACCG CTCCCGAAAC CGCCTGGCAG CCGCCCGGCA TCGCGCCGCT CGATTCGAAT
GCCGAAAGCG CGATCCGCGC GCGGATCGAC GGCAAGGCCA AGCCGCTCGG CTCACTCGGG
CAGATCGAGG ACCTCGCGGT GCAGCTCGGC CAGATCCGGC ATCCCGGCGA GCCGCGCGGC
GACAACGCGG TGCTGCTGGT GTTCGCCGGC GATCATGGGC TCACCGAAGA AGGCGTCTCG
CAATTTCCCG CCGCGGTGAC GGTGGGGATG GTGATGACCT ATCTGGCCGG CCGCGCCTGC
GCCAACGCCT TCGCCGCGGC GACCAATGTA GAAATTCGCG TGGTCGACGC AGGCGTCGCC
GCCGAACTGC CGAAACATCC CGGACTGATC GACGCCAAAA TCCGGATGGG CACCGGCAAC
GCCGCGCGCG AGCCGGCGAT GACAAGGCAG CAGGCGATCG ACGCGCTCGA CCGCGGCTGT
CAATTGACGA TCGAGGAAAT CCGCAACGGC GCTGACATCA TCGCGCTCGG CGAAATGGGC
ATCGGCAACA CCGCCTCCTC CTCGCTGCTG CTGCATCGGT TGGCGCCGGC GCCGCTCGAA
GAGTGCATCG GGGTCGGCGC CGGGCAGAAC GATGCCGGCA TGGCGAAGAA GCGCGCGGCG
ATTGAAAAAG CCGCGGCGCG CAGCGCCGCC ACCGCGCCGC TCGACGTGCT CGCCGAATTC
GGCGGGCTGG AAATCGCCAT GATGACCGGC GCCATTCTCG GCGCCGCCTC GCAGCGCCGC
CCGGTGATCG TGGACGGCTT CATCTCGACC GCGGCGGCGT TGCTGGCAGT CCGGCTGGCG
CCGGCTTCGC TCGGCTATTG CGTGTTCGCG CATCGCTCCG CCGAGCGTGG CCACGACCTG
GCGCTCGAAG CGATGCAGGC CAAGCCGCTG CTCGATCTCG GGCTGCGGCT CGGCGAAGGC
ACCGGCGCCA TTCTCGCGGT GCCGTTGCTG CGCGCCGCGG CGCGGCTGCT GACCGACGTC
GCCAGCCTCA GCGACGTGAT GGACGGCAAA CTGTAA
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| Protein sequence | MLTAPETAWQ PPGIAPLDSN AESAIRARID GKAKPLGSLG QIEDLAVQLG QIRHPGEPRG
DNAVLLVFAG DHGLTEEGVS QFPAAVTVGM VMTYLAGRAC ANAFAAATNV EIRVVDAGVA
AELPKHPGLI DAKIRMGTGN AAREPAMTRQ QAIDALDRGC QLTIEEIRNG ADIIALGEMG
IGNTASSSLL LHRLAPAPLE ECIGVGAGQN DAGMAKKRAA IEKAAARSAA TAPLDVLAEF
GGLEIAMMTG AILGAASQRR PVIVDGFIST AAALLAVRLA PASLGYCVFA HRSAERGHDL
ALEAMQAKPL LDLGLRLGEG TGAILAVPLL RAAARLLTDV ASLSDVMDGK L
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