| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3746 |
|---|
| Symbol | |
|---|
| ID | 3970341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 4171967 |
|---|
| End bp | 4172593 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637926856 |
|---|
| Product | cob(I)yrinic acid a,c-diamide adenosyltransferase |
|---|
| Protein accession | YP_533600 |
|---|
| Protein GI | 90425230 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2109] ATP:corrinoid adenosyltransferase |
|---|
| TIGRFAM ID | [TIGR00708] cob(I)alamin adenosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0580442 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGC CGCCCAGCGA CGACGAAGAC AATCTGCGCC ACGCCGAGAA GGCCAAGAAG
CACAAGGCGG TGCGCGACAA GATGATGGCC GGCAAGATCG GCGAAAAGGG TTTGCTGATC
GTTCACACCG GCACCGGCAA GGGCAAGACC TCGGCGGCGC TCGGCATGGT GTTCCGCCAC
ATCGGCCACG GCATGCCGGT CGGCGTGGTG CATTTCACCA AGTCGCAGAA ATGGGACACC
GGCGAAGCCA AGCTGCTGTC GAAATTTCCC GAGCTGGTGA CGCTGCACAT CATGGGCGAG
GGCTTCACCT GGGAGACCCA GGATCGCGCT CGCGACATCG CCGCCGCCCG CGCCGGCTGG
GAGCGCGCCA AGGAGCTGAT CCGCGACCAC CGCCACCGCA TGGTGCTGCT CGACGAGCTC
AACATCGTGC TGCGCTACGA CTACCTGCCG CTCGACGAGG TGCTGACGTT TCTGCGCGAC
GAGAAGCCGG CCGACAAGCA CGTCGTCATC ACCGGCCGCA ACGCCAAACC GGAACTGATC
GAGCTCGCCG ATCTGGTGAC CGAGATGACG CTGGTCAAAC ATCCGTTCCG CGCCGGCGTC
AAAGCCCAGA AGGGCGTGGA GTTTTAG
|
|---|
| Protein sequence | MTAPPSDDED NLRHAEKAKK HKAVRDKMMA GKIGEKGLLI VHTGTGKGKT SAALGMVFRH
IGHGMPVGVV HFTKSQKWDT GEAKLLSKFP ELVTLHIMGE GFTWETQDRA RDIAAARAGW
ERAKELIRDH RHRMVLLDEL NIVLRYDYLP LDEVLTFLRD EKPADKHVVI TGRNAKPELI
ELADLVTEMT LVKHPFRAGV KAQKGVEF
|
|---|
| |