| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3742 |
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| Symbol | |
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| ID | 3970337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4166500 |
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| End bp | 4168041 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637926852 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_533596 |
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| Protein GI | 90425226 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00121597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.955907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGCGGC TGACGCAGCC GCAGAGCGAG GATCGGGGCG CCGTGCGGCG CGCGGTTTTG
ATCGTCCTGG TCCTGGTCGG GCTGCGTCTG GTCGTGGCCG CGATCACGCC GTTGACCTTC
GACGAAGCCT ATTACTGGAC CTGGTCGAAG AACCTGGCCG GCGGCTATTA CGATCATCCG
CCGATGGTCG CGCTGATGAT CCGGCTCAGC ACGCTGATCG CCGGCGACAG TGAATTCGGC
GTCCGCTGGC TCTCGGTGCT GCTGGCATTG CCGATGAGCT GGGCGGTGTA TCGCAGCGGC
GCCATCCTGT TCGGCTCGGC GCGCGTCGGC GCCACCGCGG CGATCCTGTT CAACACCACG
ATGATGGCCT GGCTCGGCAC CATCATGGCG ACGCCGGACG TGCCCTTGAT GCTGGCGTCG
AGCCTGCTGC TGTGGTCGCT CGCCAAACTG CTGCAGAGCG GGCGCGGCGT ATGGTGGCTC
GCGGCAGGTG CCGCGGTTGG CGCGGCGCTG CTGTCGAAAT ACAACGCGTT GTTCTTCGGT
CCCACGCTGC TGATCTGGCT GATCGTGGTT GCGGATCTGC GGCGCTGGTT GCGCTCGCCG
TGGCCTTATC TGGGCGGGCT GGTGGCGCTG GCACTGTTCT CTCCGACGCT ATTGTGGAAC
GCACAGCACG AATGGGCGTC GTTCCTCAAG CAGTTCGGCC GCGTCGGCGC CGCTGATTTT
CGCCCCGGCT TCCTGCTCGG CATGCTGGGC GGCCAGTTCC TGGTGATGAC GCCGGCGGTG
GCGATCCTTG GCTGCAGCGG GCTGGTTGCG ATGGCGCGCG GCGCCACCGG ACTACGCGGC
GCCGCCGCGC TGCTGCACAT CACGATCTGG GTGGTGGTGG CCTATTTCCT GGTGCACGCG
TTGCACGAGG AGGTGCATCC CGACTGGCTG TGTCAGATCT ATCCGGCGAT GGCGATTGCC
GGGGCGGTCG CGCTGGAGCG GATGACGTGG CGGTCGCGCT GGCAACGCGT TGTGAATTTC
CTCGGCCGCT GGGCGGTGCC GGGCAGCGCG GCGATGGTGG CGCTGATCGT GCTGCAGCTG
CACACCGGCG TGCTCAGCGG CTATCGCAAC GAAGAGGGCG TGCGGCTGGT CGGCGTCGGT
TTTCGCGTTG CGGCGCACCA GATCGAGGCG ATCCGCGTTC GGCTCGGCGC CAGTTGCATC
CTGGCGGCAG ACTACGGCAC TACGAGTTGG CTGATGTTCT ATCTGCCGCC CGGCAGCTGC
GTGGCGCAGC ATTTCGAGCG GATCCGCTGG GCCAATGCCA AGGAGCCCGA TGCCGCGCTG
CTGAACGGCA AGTTGCTGTT CGTCGGGCGC TCTTCCTATC AGCATTGGCT TCACCCATGG
CTGCAGGAAG CATTCGCGAG CGTTGACAGC GTGGCGGAGG TCTCGCGCAT GCGCGGCGCG
ACGGTGATTG AAACCTACCG CATCGACCTG CTGGAAGGCG CCAAAGGCGA TATACTCCTC
CGGTGGCCGC CGCCGGAGTT GATCCGACGG CGCGGTCTCT GA
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| Protein sequence | MQRLTQPQSE DRGAVRRAVL IVLVLVGLRL VVAAITPLTF DEAYYWTWSK NLAGGYYDHP
PMVALMIRLS TLIAGDSEFG VRWLSVLLAL PMSWAVYRSG AILFGSARVG ATAAILFNTT
MMAWLGTIMA TPDVPLMLAS SLLLWSLAKL LQSGRGVWWL AAGAAVGAAL LSKYNALFFG
PTLLIWLIVV ADLRRWLRSP WPYLGGLVAL ALFSPTLLWN AQHEWASFLK QFGRVGAADF
RPGFLLGMLG GQFLVMTPAV AILGCSGLVA MARGATGLRG AAALLHITIW VVVAYFLVHA
LHEEVHPDWL CQIYPAMAIA GAVALERMTW RSRWQRVVNF LGRWAVPGSA AMVALIVLQL
HTGVLSGYRN EEGVRLVGVG FRVAAHQIEA IRVRLGASCI LAADYGTTSW LMFYLPPGSC
VAQHFERIRW ANAKEPDAAL LNGKLLFVGR SSYQHWLHPW LQEAFASVDS VAEVSRMRGA
TVIETYRIDL LEGAKGDILL RWPPPELIRR RGL
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