Gene RPC_3740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3740 
Symbol 
ID3970335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4165751 
End bp4166194 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content68% 
IMG OID637926850 
Producthypothetical protein 
Protein accessionYP_533594 
Protein GI90425224 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00447243 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGGTC GATTTGGTTT CGTCGCGGTT TTGTTGAGCG CGCTGGCCGC CGCACCGAAC 
GCCCACGCCC AGACTCCCGC CGCGGCCATT GGGGTTTGGC TGACCCAGGC CGGCGACGCC
AAGGTGAAGG TTGCCAAATG CGGCGCGGCG TTGTGCGGCA CCGTGGTTTG GCTCAAGGAG
CCGGTCGATC GGGCCACCGG CAAGCCCGCG ATCGACGACA AGAATCCGGA TCCGGCGCGC
GCCACCCGCC CGGTGATCGG GCTGCAGATC TTCGGCGACA TGCGGCCGGT GGCGCCGGGC
AAATGGTCGG GCCACATCTA CAATGCCGAC GACGGCAAGA CCTATGAGAG CAGCATCTCG
GCGATCGACG CCGGCACGCT CAAGGTCGAA GGCTGCGTCG GCGCGCTGTG CGGCGGCGAG
GCCTGGACCC GCGCCGGCAA ATAA
 
Protein sequence
MMGRFGFVAV LLSALAAAPN AHAQTPAAAI GVWLTQAGDA KVKVAKCGAA LCGTVVWLKE 
PVDRATGKPA IDDKNPDPAR ATRPVIGLQI FGDMRPVAPG KWSGHIYNAD DGKTYESSIS
AIDAGTLKVE GCVGALCGGE AWTRAGK