| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3733 |
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| Symbol | |
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| ID | 3971478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4155560 |
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| End bp | 4156579 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637926843 |
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| Product | luciferase-like |
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| Protein accession | YP_533587 |
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| Protein GI | 90425217 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.386394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCTC TCTCCATTCT CGATCTGTCG GTGGTGACCA CCGGCACCAA ACCCGCCGCG
GCGTTGCGCA ACAGCATCGA TCTGGCCAAG CACGCCGACA AGCTCGGTTA CGCGCGCTAT
TGGCTGGCCG AGCATCACAG CCTGTCGTCG GTGGCGAGCC CGGCGCCCGA CATTATGATC
GGCCAGATCG CCGCGGTGAC CAGCCAGATC CGGGTCGGTT CCGGCGGCGT GATGCTGCCG
AACCATGCGC CGCTGGTGAT CGCCGAACGC TTCAAGATGC TGGAGGCGCT GTTTCCCGGC
CGCATCGATC TCGGCCTCGG CCGCGCGCCC GGCACCGACC AGGCCACCGC GCACGCGCTG
CGGCGCCGGC TCGACGTCCG CGAGGGCGAC GATTTCCTTG AGCGGCTGCA GGAATTGACG
CTGTGGGAGA CCCGCGAGTT TCCGCCCGGC CACCCTTACA ACAACGTCGT CGCGATGCCC
GATGATGCGC CGCTGCCGCC GATCTTTTTG CTCGGCTCCA GCGACTACAG TTCGGAGCTG
GCGGCGCAGG TCGGCATGGG ATTCGCTTTC GCGCATCACT TCGCCTCCTA TGACGCGATC
GCGGCGCTGA CCGGCTATCG CCGCGCGTTC CAGCCGTCGC GCTGGCGCCG CGCGCCGCAC
GCCATTCTCG CCGTCGCCGC GGTGGTCGCC GAGACCGACG CCGAGGCCGA GCGGCAGGCC
TCGTCGATGG ATCTCAACCG GCTGCTGCGC AGTCGCGGTC AGTATCTGCC GCTGCCGAGC
ATCGAGGAGG CGCTGGCCTA TCCTTACAGC GAGCGCGACC GGGCGCTGAT CGCGCGCGAC
CGCGAGAAGC TGTTCGTCGG CAGTGCGGCG ACGGTGATGG CCGCGTTGCA GCCGATGATC
GAGGCCAGCC ACGCCGACGA AGTCATGGTG ATCACCGCGA CCTTCGACCA CGAGGCGCGC
AAGCGCTCGT ACAGTCTGCT GGCGGAAGCA TTCGGGCTCG GCAACCGCGC GGCGGCATAG
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| Protein sequence | MTPLSILDLS VVTTGTKPAA ALRNSIDLAK HADKLGYARY WLAEHHSLSS VASPAPDIMI
GQIAAVTSQI RVGSGGVMLP NHAPLVIAER FKMLEALFPG RIDLGLGRAP GTDQATAHAL
RRRLDVREGD DFLERLQELT LWETREFPPG HPYNNVVAMP DDAPLPPIFL LGSSDYSSEL
AAQVGMGFAF AHHFASYDAI AALTGYRRAF QPSRWRRAPH AILAVAAVVA ETDAEAERQA
SSMDLNRLLR SRGQYLPLPS IEEALAYPYS ERDRALIARD REKLFVGSAA TVMAALQPMI
EASHADEVMV ITATFDHEAR KRSYSLLAEA FGLGNRAAA
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