| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3731 |
|---|
| Symbol | |
|---|
| ID | 3971476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 4152936 |
|---|
| End bp | 4153673 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637926841 |
|---|
| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
|---|
| Protein accession | YP_533585 |
|---|
| Protein GI | 90425215 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
|---|
| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGA CCAAAACGCT GGTGCTGATT CCCGCCCGCA TGGCCGCGAC GCGGCTGCCG
GGCAAGCCGT TGATGGACAT CGCCGGGCTG CCGATGATCG TGCATGTGCT GCGCCGCGCC
GAAGCCGCGG CGATCGGCCC GGTCGCGGTG GCCACCGACA CCGCCGAGAT CGCCGACGTG
GTGACCGCGC ATGGCGGTCG GGTGGTGATG ACCAGGGCCG ACCATCCGTC CGGGTCGGAC
CGCATCTTCG AGGCGTTGAG CAAGCTCGAC CCCGACGGCG CCGTCGAGAC CGTGGTCAAT
CTGCAGGGCG ATTTTCCGAC CATCCAGCCG GACAATATTC GCGCGGTGCT GGAGCCGCTG
GCCGATCCCG CCGTCGACAT CGCGACGCTG GCGGCGCAGA TCCACACCGA GGAAGAGAGC
CTCAACCCCA ACGTGGTCAA GGTGATCGGC TCGCCGCTCG GCGACCGCCG GTTGCGGGCG
CTGTATTTCA CCCGCGCCAC GGCACCATGG GGCGACGGCC CGCGCTATCA CCACATCGGG
CTCTATGCCT ATCGCCGCGC GGCGCTGCAG CGTTTCGTCA GCCTGCCGCC CTCGCCGCTG
GAGCGGCGCG AAAAACTCGA ACAGTTGCGC GCACTGGAGG CCGGGATGCG GATCGACGTC
GGCATCGTCG ACGCTGTGCC GCGCGGCGTC GATACCGCGG CGGATCTCGA GACCGCGCGG
CGCGTGCTGG CGCACTGA
|
|---|
| Protein sequence | MTETKTLVLI PARMAATRLP GKPLMDIAGL PMIVHVLRRA EAAAIGPVAV ATDTAEIADV
VTAHGGRVVM TRADHPSGSD RIFEALSKLD PDGAVETVVN LQGDFPTIQP DNIRAVLEPL
ADPAVDIATL AAQIHTEEES LNPNVVKVIG SPLGDRRLRA LYFTRATAPW GDGPRYHHIG
LYAYRRAALQ RFVSLPPSPL ERREKLEQLR ALEAGMRIDV GIVDAVPRGV DTAADLETAR
RVLAH
|
|---|
| |