Gene RPC_3730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3730 
Symbol 
ID3971475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand- 
Start bp4152148 
End bp4152702 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content63% 
IMG OID637926840 
Productcytochrome c, class I 
Protein accessionYP_533584 
Protein GI90425214 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCCT TTGAATTGAA TAAAGTGCTG GGTGCGGTTC TTGCGACCTG CCTCATGCTG 
CTGGTTTCCA ATCTCGCCGC CCAGGCGATC TTCGCACCGA TCAAGCCGGA TAAGCCCGGG 
TATAGTATTG CCGTCAAGGA AGAGGCTCCC CCCGCCGCCA AGGATGCGGC GCCCGCCGCG 
CCGTCGGAGC CGATCGAAAA GCTGCTGCAG ACCGCGTCAG TCGAAAAGGG CATGGCCGCG 
GCTAAGAAAT GCGCGGCCTG CCACACCTTC GAAAAGGGCG GACCGAACCG AACCGGGCCG 
AATTTGTTCG GCGTGGTCGG CGACCATATC GGCGAAGGCC GCAACGGCTT CAATTTCTCG 
GCGGCGATGA AGGCCAAGGG CGGCAGCTGG ACCTTCGACG CATTGAACCA GTTCCTCGCC 
AGCCCGAAGG GCTATATTCC GGGGACCGCG ATGGGCTTCG CCGGCATTCC AAAGGACAGC 
GAACGCGCCG ACGTGATCAG CTATCTGCGC AGCTTGGCCG ACACGCCGGT TCCGATCCCG 
ACCGCGGCGA AGTAG
 
Protein sequence
MDSFELNKVL GAVLATCLML LVSNLAAQAI FAPIKPDKPG YSIAVKEEAP PAAKDAAPAA 
PSEPIEKLLQ TASVEKGMAA AKKCAACHTF EKGGPNRTGP NLFGVVGDHI GEGRNGFNFS 
AAMKAKGGSW TFDALNQFLA SPKGYIPGTA MGFAGIPKDS ERADVISYLR SLADTPVPIP 
TAAK