| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3717 |
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| Symbol | |
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| ID | 3972340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4137495 |
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| End bp | 4138469 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637926827 |
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| Product | type II secretion system protein |
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| Protein accession | YP_533571 |
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| Protein GI | 90425201 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.20351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATAC AAACGCTCGC CATCGCTTTC CTCTCCGCCA TGGCGGTGGG TGGCCTGGCA
TGGGTCTTCA TCTACCCGTC GCTGTCGGGA CAAAAAACCG CCGAACAGCG CCGCGCGTCG
CTGGCCCGTC CGGAACCGGT GGTGCGGCAG ATCGACAGAA CGCAGCGATC GCGCCGTGAG
CAGGTCGAAG GATCGCTGAA GGAAGTCGAA GCCCGGCACC GGAAAGAAAA GAAGGTCGCG
CTGACCACGC GGCTGACCCA GGCCGGGGTG AAATGGACGC CGAAGGGATT TCTGATCGGC
TCCGCCGTGC TCGGCGTGAC GATGTTTGCG ATCACCTCCC TGCTGGGCGG CGGCCTGCTC
GCCGCGCTCG CTCTTGGCTT TGCGGCCGGC TTCGGGCTGC CGCGCTGGGC GTTGAATTTC
CTGAAGAAGC GCCGCGAAAA GAACTTCCTC AAGGCGCTGC CCGATGCCGT CGACGTCATC
GTGCGCGGCA TCAAGGCCGG GCTGCCGCTG TTCGACTCGC TAAAGGTGGT CGCCGCCGAC
GCCCCGGAGC CGCTGAAGAG CGAATTCCTG GCGATCCTGG AGACCCAGGC GATCGGCATG
CCGCTCGGCG AAGCCTGCGC GCGGCTGTAC GAGCGAATGC CGCTGCCGGA AGCCAACTTC
TTCGGCATCG TGATCGCGAT CCAGCAGAAG TCCGGCGGCA ATCTGTCGGA AGCGCTGGGC
AACCTGTCCA AGGTGCTGCG CGACCGCAAG CGAATGGCGG AAAAGATTCA GGCGATGTCG
ATGGAAGCCA AGGCCTCCGC CGGCATCATC GGCTCATTGC CGCCGATCGT GATGTTGTTG
GTCTACCTGT CGACACCGGA CTACATCTCG CTGTTGTGGA CCCATCCGAC CGGCCAGCTG
ATGCTGGCCG GCTGCGTGTT GTGGATGGCG ATCGGCATCT TCGTGATGAA GCAAATGATC
AACTTCGACT TTTGA
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| Protein sequence | MLIQTLAIAF LSAMAVGGLA WVFIYPSLSG QKTAEQRRAS LARPEPVVRQ IDRTQRSRRE
QVEGSLKEVE ARHRKEKKVA LTTRLTQAGV KWTPKGFLIG SAVLGVTMFA ITSLLGGGLL
AALALGFAAG FGLPRWALNF LKKRREKNFL KALPDAVDVI VRGIKAGLPL FDSLKVVAAD
APEPLKSEFL AILETQAIGM PLGEACARLY ERMPLPEANF FGIVIAIQQK SGGNLSEALG
NLSKVLRDRK RMAEKIQAMS MEAKASAGII GSLPPIVMLL VYLSTPDYIS LLWTHPTGQL
MLAGCVLWMA IGIFVMKQMI NFDF
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