| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3715 |
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| Symbol | |
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| ID | 3972338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4134715 |
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| End bp | 4135986 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637926825 |
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| Product | putative pilus assembly protein cpaE |
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| Protein accession | YP_533569 |
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| Protein GI | 90425199 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.522305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGTT ACGCACGCCA GACCTCCGAA GACGAGCAGA CCGCAGCGGC GCAGCCGACG
CCGGAAGAGC ATATTGCGCC GGCGCCGCGG GTGTCGGTGC AGGCGTTCTG CGAAACCGTC
GAGACCGCCG CGGCGGTGCA GGCCGCCGGC GAAGATCGCC GGCTCGACAA GGCGCACCTC
AAGATCCAGA TGGGCGGCAT GGCGGCCGCC ATCGAGGCCT ATCGCTCGGC CCCGACGCCG
AATGTCATCA TCCTGGAAAC CGATCCTCGC AGCGACATCC TGGCCGGGCT CGACCAGCTT
GCCACGGTTT GCGACGCCGG CACCCGGGTG ATCGTCATCG GTCGGGTCAA CGACGTCACG
CTGTACCGCG AACTGGTTCG TCGCGGCGTC AGCGACTACG TCATCGCGCC GGTGGTGCCG
ATCAAGATCG TCGGCTCGAT CTGCGGGCTA TTCTCGGCGC CCGAAGCCCG CGCGGTCGGC
CGCATCATCG CGGTGGTCGG CGCCAAGGGC GGCGTCGGCG CCTCCACCAT CGCCCACAAT
GTCGCCTGGG CGATCGCCCG CGACCTGGCG CTGGATTCGG TGGTCGCGGA CCTCGACCTC
GCCTTCGGCA CCGCAGGGCT CGACTACAAT CAGGATCCGC CGCAGGGCAT CGCCGACGCG
GTGTTCTCGC CCGACCGCGT CGACACCGCG TTCATCGACC GGCTGCTGTC GAAATGCACC
GATCACCTCA GCCTGCTGGC GGCGCCGGCG ACGCTGGAGC GGGTCTACGA TTTCGGCACC
GAAGCCTTCG ACTCGATCTT CGACACCTTG CGCACCACGA TGCCCTGCAT CGTGCTGGAC
GTGCCGCATC AATGGTCCGG CTGGACCAAA CGCGCCCTGG TCAGCGCCGA CGATATTCTG
ATCGTCGCGG CGCCGGATCT CGCCAATCTG CGCAACGCCA AGAACATGTA CGATCTGTTG
AAGGCGGCGC GGCCGAACGA CCGCCCGCCG CACTACTGCC TGAACCAGGT CGGCGTGCCG
AAACGCCCGG AGATCAACGC CAACGAGTTC GCCAAGGCGA TCGAAAGTCC GCCGGTGGTC
AGCATTCCGT TCGACCCGCA GATCTTCGGC GCGGCCGCCA ACAACGGCCA GATGATCGCC
GAGATTTCCG CCAACCATCG TGCCGCCGAG ATGTTCTTGC AGATCGCCCA GCGCATGACC
GGCCGCGGCG AAACCAAGAA GCCGCGCGGC TCGTTCATCG CGCCGTTCCT CGAGAAGTTG
CGGGCGAAAT AA
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| Protein sequence | MISYARQTSE DEQTAAAQPT PEEHIAPAPR VSVQAFCETV ETAAAVQAAG EDRRLDKAHL
KIQMGGMAAA IEAYRSAPTP NVIILETDPR SDILAGLDQL ATVCDAGTRV IVIGRVNDVT
LYRELVRRGV SDYVIAPVVP IKIVGSICGL FSAPEARAVG RIIAVVGAKG GVGASTIAHN
VAWAIARDLA LDSVVADLDL AFGTAGLDYN QDPPQGIADA VFSPDRVDTA FIDRLLSKCT
DHLSLLAAPA TLERVYDFGT EAFDSIFDTL RTTMPCIVLD VPHQWSGWTK RALVSADDIL
IVAAPDLANL RNAKNMYDLL KAARPNDRPP HYCLNQVGVP KRPEINANEF AKAIESPPVV
SIPFDPQIFG AAANNGQMIA EISANHRAAE MFLQIAQRMT GRGETKKPRG SFIAPFLEKL
RAK
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