Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3712 |
Symbol | |
ID | 3972335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4131665 |
End bp | 4132462 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637926822 |
Product | Flp pilus assembly CpaB |
Protein accession | YP_533566 |
Protein GI | 90425196 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.241083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCG CACGCATTGT CGTCCTGACC ATCGCTGTCG GTGCCGGCGG CGTTGCCGCC TATCTCGCCA GCGGCGCCGA CCAGCAGCCG CCGCCGGCAG CGCCGGTGGC CCAGCTGCCG ACGGTGGACG TGCTGGTCGC GAAATCGGAC ATCCCGCTGG GACAGGCGCT CACCCCGGGC GACGTGCAGT GGCAGGTCTG GCCGGCGGCC ACCGCCAGCG AAATGTTCAT CCGTCGCAAT GTGCGCCCGG ACGCCACCAC CCAGATCGTC GGATCGATCG CGCGCTCGGC CTTCATCGCC GGCGAGCCGA TCCGGGATCT GAAACTGGTC AAGGCCAACG GCTCCGGCTT CATGGCGGCG ATTCTGCCGT CCGGGATGCG CGCGGTCTCG ACCGAAATCT CACCGGAAAC CGGCGCCGGC GGCTTCATCC TGCCGAACGA CCGGGTCGAC GTCATTCTGT CCAAGCGCGA GAAGAATCCC GACGCGCGCG CCTCCGGCGA CGGCGTCAAT TCCGAGATCA TCCTCAGCAA CATCCGGGTG CTGGCGATCG ACCAGACCAT CGAGGAGAAG AACGGGCAGA AGGTCGTGGT CGGCAAGACC GCGACGCTCG AACTGAAGCC CGAGCAATCC GAGGGGCTGG CCCGCGCCCG CCAGAGCGGC ACGCTGTCGC TGGCGCTGCG CAGCCTGGCC GACGCCAATT CGGCGGTCGC CGATACTCCC GACGATCGCA GCGCCAAGCG CGACAGCATC AATGTGGTGC GATTCGGTGT TTCGACCCCG ACCACGACCC AGAAGTGA
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Protein sequence | MNTARIVVLT IAVGAGGVAA YLASGADQQP PPAAPVAQLP TVDVLVAKSD IPLGQALTPG DVQWQVWPAA TASEMFIRRN VRPDATTQIV GSIARSAFIA GEPIRDLKLV KANGSGFMAA ILPSGMRAVS TEISPETGAG GFILPNDRVD VILSKREKNP DARASGDGVN SEIILSNIRV LAIDQTIEEK NGQKVVVGKT ATLELKPEQS EGLARARQSG TLSLALRSLA DANSAVADTP DDRSAKRDSI NVVRFGVSTP TTTQK
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